STRINGSTRING
ENSPKIP00000008065 ENSPKIP00000008065 Ddb1 Ddb1 UBB UBB rps27a rps27a chd1l chd1l rnf111 rnf111 ENSPKIP00000006756 ENSPKIP00000006756 LOC111834205 LOC111834205 gtf2h5 gtf2h5 ube2n ube2n gtf2h1 gtf2h1 ENSPKIP00000013319 ENSPKIP00000013319 ercc3 ercc3 meiob meiob ccnh ccnh LOC111846432 LOC111846432 LOC111832811 LOC111832811 ube2v2 ube2v2 Bivm Bivm kxd1 kxd1 LOC111840804 LOC111840804 Ddb2 Ddb2 RBX1 RBX1 SUMO3 SUMO3 rpa2 rpa2 parp3 parp3 cetn3 cetn3 ENSPKIP00000021462 ENSPKIP00000021462 uba52 uba52 parp1 parp1 RAD23B RAD23B ercc2 ercc2 ENSPKIP00000024136 ENSPKIP00000024136 ercc1 ercc1 parp2 parp2 ENSPKIP00000025031 ENSPKIP00000025031 rpa1 rpa1 LOC111858299 LOC111858299 ercc5 ercc5 ENSPKIP00000026563 ENSPKIP00000026563 LOC111858369 LOC111858369 ENSPKIP00000026851 ENSPKIP00000026851 LOC111833512 LOC111833512 LOC111851430 LOC111851430 Cul4a Cul4a ENSPKIP00000028015 ENSPKIP00000028015 LOC111860379 LOC111860379 rpa3 rpa3 gtf2h4 gtf2h4 LOC111849321 LOC111849321 LOC111856488 LOC111856488 cul4b cul4b xpc xpc ENSPKIP00000035697 ENSPKIP00000035697 gtf2h2c gtf2h2c ENSPKIP00000036698 ENSPKIP00000036698 cdk7 cdk7 pias1 pias1 ercc4 ercc4 LOC111844327 LOC111844327 mnat1 mnat1 Xpa Xpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSPKIP00000008065General transcription factor IIH, polypeptide 3. (293 aa)
Ddb1Damage-specific DNA binding protein 1. (1142 aa)
UBBUbiquitin B. (230 aa)
rps27aRibosomal protein S27a. (156 aa)
chd1lChromodomain helicase DNA binding protein 1-like. (1001 aa)
rnf111Ring finger protein 111. (993 aa)
ENSPKIP00000006756Ubiquitin carboxyl-terminal hydrolase. (760 aa)
LOC111834205Small ubiquitin-related modifier. (95 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
ube2nUbiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (182 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (544 aa)
ENSPKIP00000013319VWFA domain-containing protein. (262 aa)
ercc3Excision repair cross-complementation group 3. (786 aa)
meiobMethionine sulfoxide reductase B1b. (468 aa)
ccnhCyclin H; Belongs to the cyclin family. (325 aa)
LOC111846432Ubiquitin-conjugating enzyme E2Ia; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
LOC111832811Uncharacterized protein. (171 aa)
ube2v2Ubiquitin-conjugating enzyme E2 variant 2. (180 aa)
BivmBasic, immunoglobulin-like variable motif containing. (497 aa)
kxd1KxDL motif containing 1. (178 aa)
LOC111840804Small ubiquitin-related modifier. (101 aa)
Ddb2Damage-specific DNA binding protein 2. (453 aa)
RBX1RING-type domain-containing protein. (108 aa)
SUMO3Small ubiquitin-related modifier. (106 aa)
rpa2Replication protein A2. (339 aa)
parp3Poly [ADP-ribose] polymerase. (531 aa)
cetn3Centrin 3. (181 aa)
ENSPKIP00000021462Ubiquitin-like domain-containing protein. (159 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1011 aa)
RAD23BRAD23 homolog B, nucleotide excision repair protein. (384 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
ENSPKIP00000024136UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (188 aa)
ercc1Excision repair cross-complementation group 1. (325 aa)
parp2Poly [ADP-ribose] polymerase. (572 aa)
ENSPKIP00000025031Uncharacterized protein. (171 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (610 aa)
LOC111858299Small ubiquitin like modifier 1. (126 aa)
ercc5Excision repair cross-complementation group 5. (1172 aa)
ENSPKIP00000026563VIT domain-containing protein. (519 aa)
LOC111858369Small ubiquitin-related modifier. (94 aa)
ENSPKIP00000026851Ring-box 1, E3 ubiquitin protein ligase. (112 aa)
LOC111833512RAD23 homolog A, nucleotide excision repair protein a. (349 aa)
LOC111851430Ubiquitin-like domain-containing protein. (77 aa)
Cul4aCullin 4A; Belongs to the cullin family. (750 aa)
ENSPKIP00000028015RAD23 homolog B, nucleotide excision repair protein. (413 aa)
LOC111860379RAD23 homolog A, nucleotide excision repair protein b. (428 aa)
rpa3Replication protein A3. (123 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
LOC111849321Potassium channel tetramerization domain containing 2. (260 aa)
LOC111856488Ubiquitin-like domain-containing protein. (95 aa)
cul4bCullin 4B; Belongs to the cullin family. (858 aa)
xpcXeroderma pigmentosum, complementation group C. (870 aa)
ENSPKIP00000035697Von Willebrand factor A domain containing 5B2. (1027 aa)
gtf2h2cGeneral transcription factor IIH subunit. (407 aa)
ENSPKIP00000036698Uncharacterized protein. (186 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (348 aa)
pias1Protein inhibitor of activated STAT, 1b. (656 aa)
ercc4Excision repair cross-complementation group 4. (893 aa)
LOC111844327UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (315 aa)
XpaXeroderma pigmentosum, complementation group A. (272 aa)
Your Current Organism:
Paramormyrops kingsleyae
NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae
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