51 items (Paramormyrops kingsleyae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PCNA	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	Xpa	Xeroderma pigmentosum, complementation group A. (272 aa)
	rfc3	Replication factor C (activator 1) 3. (356 aa)
	ercc4	Excision repair cross-complementation group 4. (893 aa)
	polk	Polymerase (DNA directed) kappa. (894 aa)
	rfc2	Replication factor C (activator 1) 2. (351 aa)
	Pold4	Si:dkey-28b4.7. (121 aa)
	gtf2h2c	General transcription factor IIH subunit. (407 aa)
	cul4b	Cullin 4B; Belongs to the cullin family. (858 aa)
	LOC111843688	BTB domain-containing protein. (532 aa)
	ENSPKIP00000032000	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (612 aa)
	gtf2h4	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
	rpa3	Replication protein A3. (123 aa)
	Cul4a	Cullin 4A; Belongs to the cullin family. (750 aa)
	LOC111851430	Ubiquitin-like domain-containing protein. (77 aa)
	ENSPKIP00000026851	Ring-box 1, E3 ubiquitin protein ligase. (112 aa)
	rfc5	Replication factor C (activator 1) 5. (336 aa)
	ercc5	Excision repair cross-complementation group 5. (1172 aa)
	rpa1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (610 aa)
	ENSPKIP00000025031	Uncharacterized protein. (171 aa)
	parp2	Poly [ADP-ribose] polymerase. (572 aa)
	ercc1	Excision repair cross-complementation group 1. (325 aa)
	ercc2	Excision repair cross-complementation group 2. (760 aa)
	parp1	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1011 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	parp3	Poly [ADP-ribose] polymerase. (531 aa)
	rpa2	Replication protein A2. (339 aa)
	rfc1	Replication factor C subunit 1. (1155 aa)
	RBX1	RING-type domain-containing protein. (108 aa)
	Ddb2	Damage-specific DNA binding protein 2. (453 aa)
	kxd1	KxDL motif containing 1. (178 aa)
	Bivm	Basic, immunoglobulin-like variable motif containing. (497 aa)
	ENSPKIP00000016002	Uncharacterized protein. (385 aa)
	pold2	Polymerase (DNA directed), delta 2, regulatory subunit. (470 aa)
	ercc3	Excision repair cross-complementation group 3. (786 aa)
	pole4	Polymerase (DNA-directed), epsilon 4, accessory subunit. (122 aa)
	gtf2h1	General transcription factor IIH, polypeptide 1. (544 aa)
	pole3	Polymerase (DNA directed), epsilon 3 (p17 subunit). (148 aa)
	ENSPKIP00000011404	Polymerase (DNA-directed), delta 3, accessory subunit. (395 aa)
	Pole	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2251 aa)
	gtf2h5	General transcription factor IIH, polypeptide 5. (71 aa)
	ENSPKIP00000008065	General transcription factor IIH, polypeptide 3. (293 aa)
	pole2	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
	rfc4	Replication factor C (activator 1) 4. (357 aa)
	chd1l	Chromodomain helicase DNA binding protein 1-like. (1001 aa)
	LOC111858065	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (618 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	pold1	DNA polymerase. (1105 aa)
	UBB	Ubiquitin B. (230 aa)
	Ddb1	Damage-specific DNA binding protein 1. (1142 aa)
	LOC111861157	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bivm	Cul4a	ENSPKIP00000016488	ENSPKIP00000027645	Basic, immunoglobulin-like variable motif containing.	Cullin 4A; Belongs to the cullin family.	0.618
Bivm	Ddb1	ENSPKIP00000016488	ENSPKIP00000000663	Basic, immunoglobulin-like variable motif containing.	Damage-specific DNA binding protein 1.	0.791
Bivm	Ddb2	ENSPKIP00000016488	ENSPKIP00000017830	Basic, immunoglobulin-like variable motif containing.	Damage-specific DNA binding protein 2.	0.750
Bivm	ENSPKIP00000008065	ENSPKIP00000016488	ENSPKIP00000008065	Basic, immunoglobulin-like variable motif containing.	General transcription factor IIH, polypeptide 3.	0.757
Bivm	ENSPKIP00000025031	ENSPKIP00000016488	ENSPKIP00000025031	Basic, immunoglobulin-like variable motif containing.	Uncharacterized protein.	0.780
Bivm	ENSPKIP00000026851	ENSPKIP00000016488	ENSPKIP00000026851	Basic, immunoglobulin-like variable motif containing.	Ring-box 1, E3 ubiquitin protein ligase.	0.534
Bivm	LOC111851430	ENSPKIP00000016488	ENSPKIP00000027611	Basic, immunoglobulin-like variable motif containing.	Ubiquitin-like domain-containing protein.	0.443
Bivm	LOC111861157	ENSPKIP00000016488	ENSPKIP00000000082	Basic, immunoglobulin-like variable motif containing.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.864
Bivm	PCNA	ENSPKIP00000016488	ENSPKIP00000013621	Basic, immunoglobulin-like variable motif containing.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.864
Bivm	Pold4	ENSPKIP00000016488	ENSPKIP00000036832	Basic, immunoglobulin-like variable motif containing.	Si:dkey-28b4.7.	0.530
Bivm	Pole	ENSPKIP00000016488	ENSPKIP00000009913	Basic, immunoglobulin-like variable motif containing.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.732
Bivm	RBX1	ENSPKIP00000016488	ENSPKIP00000017898	Basic, immunoglobulin-like variable motif containing.	RING-type domain-containing protein.	0.534
Bivm	UBB	ENSPKIP00000016488	ENSPKIP00000000715	Basic, immunoglobulin-like variable motif containing.	Ubiquitin B.	0.597
Bivm	Xpa	ENSPKIP00000016488	ENSPKIP00000042033	Basic, immunoglobulin-like variable motif containing.	Xeroderma pigmentosum, complementation group A.	0.837
Bivm	chd1l	ENSPKIP00000016488	ENSPKIP00000005560	Basic, immunoglobulin-like variable motif containing.	Chromodomain helicase DNA binding protein 1-like.	0.732
Bivm	cul4b	ENSPKIP00000016488	ENSPKIP00000034351	Basic, immunoglobulin-like variable motif containing.	Cullin 4B; Belongs to the cullin family.	0.618
Bivm	ercc1	ENSPKIP00000016488	ENSPKIP00000024704	Basic, immunoglobulin-like variable motif containing.	Excision repair cross-complementation group 1.	0.816
Bivm	ercc2	ENSPKIP00000016488	ENSPKIP00000023198	Basic, immunoglobulin-like variable motif containing.	Excision repair cross-complementation group 2.	0.934
Bivm	ercc3	ENSPKIP00000016488	ENSPKIP00000014245	Basic, immunoglobulin-like variable motif containing.	Excision repair cross-complementation group 3.	0.965
Bivm	ercc4	ENSPKIP00000016488	ENSPKIP00000038711	Basic, immunoglobulin-like variable motif containing.	Excision repair cross-complementation group 4.	0.899