STRINGSTRING
ENSPKIP00000030006 ENSPKIP00000030006 Tcea1 Tcea1 polr2d polr2d gtf2f1 gtf2f1 nelfcd nelfcd phf3 phf3 ctdp1 ctdp1 polr2f polr2f LOC111837106 LOC111837106 ccnh ccnh ercc3 ercc3 polr2i polr2i Polr2g Polr2g nelfb nelfb polr2b polr2b gtf2h1 gtf2h1 LOC111860656 LOC111860656 LOC111860494 LOC111860494 gtf2h5 gtf2h5 ENSPKIP00000008065 ENSPKIP00000008065 eloa eloa polr2h polr2h cdk9 cdk9 cdk12 cdk12 tcea3 tcea3 ENSPKIP00000001684 ENSPKIP00000001684 ENSPKIP00000001669 ENSPKIP00000001669 ell ell ELOB ELOB ENSPKIP00000039783 ENSPKIP00000039783 cdk7 cdk7 ENSPKIP00000037760 ENSPKIP00000037760 ENSPKIP00000036923 ENSPKIP00000036923 elob elob CCNK CCNK gtf2h2c gtf2h2c LOC111843713 LOC111843713 Gtf2f2 Gtf2f2 polr2j polr2j nelfe nelfe CCNT2-2 CCNT2-2 gtf2h4 gtf2h4 ENSPKIP00000030381 ENSPKIP00000030381 LOC111856467 LOC111856467 tceanc2 tceanc2 CDK13-2 CDK13-2 LOC111836620 LOC111836620 ELL ELL LOC111854539 LOC111854539 ENSPKIP00000024903 ENSPKIP00000024903 Ssrp1 Ssrp1 ccnq ccnq ercc2 ercc2 ENSPKIP00000022651 ENSPKIP00000022651 supt5h supt5h ENSPKIP00000021454 ENSPKIP00000021454 ENSPKIP00000021292 ENSPKIP00000021292 polr2c polr2c CCNT2 CCNT2 CDK13 CDK13 ENSPKIP00000041896 ENSPKIP00000041896 ENSPKIP00000041868 ENSPKIP00000041868 mnat1 mnat1 Polr2l Polr2l
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSPKIP00000030006Uncharacterized protein. (127 aa)
Tcea1Transcription elongation factor A (SII), 1. (371 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (534 aa)
nelfcdNegative elongation factor complex member C/D. (579 aa)
phf3PHD finger protein 3. (1801 aa)
ctdp1RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (966 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
LOC111837106Cyclin T1; Belongs to the cyclin family. (783 aa)
ccnhCyclin H; Belongs to the cyclin family. (325 aa)
ercc3Excision repair cross-complementation group 3. (786 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
Polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (198 aa)
nelfbNegative elongation factor complex member B. (583 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1231 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (544 aa)
LOC111860656Si:dkey-12j5.1. (398 aa)
LOC111860494RNA polymerase II subunit E. (210 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
ENSPKIP00000008065General transcription factor IIH, polypeptide 3. (293 aa)
eloaElongin A. (650 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
cdk9Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (424 aa)
cdk12Cyclin-dependent kinase 12. (1449 aa)
tcea3Transcription elongation factor A (SII), 3. (571 aa)
ENSPKIP00000001684TFIIS N-terminal domain-containing protein. (79 aa)
ENSPKIP00000001669Transcription elongation factor A (SII), 2. (186 aa)
ellElongation factor RNA polymerase II. (626 aa)
ELOBElongin B. (114 aa)
ENSPKIP00000039783Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (109 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (348 aa)
ENSPKIP00000037760Elongin A, like. (605 aa)
ENSPKIP00000036923Negative elongation factor complex member A. (568 aa)
elobUbiquitin-like domain-containing protein. (119 aa)
CCNKCyclin K; Belongs to the cyclin family. (562 aa)
gtf2h2cGeneral transcription factor IIH subunit. (407 aa)
LOC111843713Si:dkeyp-115e12.6. (2067 aa)
Gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (276 aa)
polr2jRNA_pol_L_2 domain-containing protein. (145 aa)
nelfeNegative elongation factor complex member E. (374 aa)
CCNT2-2Cyclin T2; Belongs to the cyclin family. (609 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
ENSPKIP00000030381Uncharacterized protein. (281 aa)
LOC111856467Uncharacterized protein. (1034 aa)
tceanc2Transcription elongation factor A (SII) N-terminal and central domain containing 2. (207 aa)
CDK13-2Cyclin dependent kinase 13. (1412 aa)
LOC111836620RNA polymerase II subunit E. (222 aa)
ELLElongation factor for RNA polymerase II. (643 aa)
LOC111854539SPT16 homolog, facilitates chromatin remodeling subunit. (1033 aa)
ENSPKIP00000024903Uncharacterized protein. (319 aa)
Ssrp1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (720 aa)
ccnqCyclin Q; Belongs to the cyclin family. (290 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
ENSPKIP00000022651Elongin C paralog a; Belongs to the SKP1 family. (162 aa)
supt5hTranscription elongation factor SPT5. (1083 aa)
ENSPKIP00000021454Uncharacterized protein. (67 aa)
ENSPKIP00000021292DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1851 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
CCNT2Cyclin T2; Belongs to the cyclin family. (701 aa)
CDK13Cyclin dependent kinase 13. (1370 aa)
ENSPKIP00000041896Elongin C paralog a; Belongs to the SKP1 family. (109 aa)
ENSPKIP00000041868Uncharacterized protein; Belongs to the SKP1 family. (82 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (315 aa)
Polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (80 aa)
Your Current Organism:
Paramormyrops kingsleyae
NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae
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