STRINGSTRING
ENSPKIP00000038497 ENSPKIP00000038497 mnat1 mnat1 Polr2l Polr2l ENSPKIP00000038668 ENSPKIP00000038668 ENSPKIP00000038554 ENSPKIP00000038554 ENSPKIP00000038535 ENSPKIP00000038535 LOC111841575 LOC111841575 ENSPKIP00000038408 ENSPKIP00000038408 ENSPKIP00000038374 ENSPKIP00000038374 cdk7 cdk7 gtf2h2c gtf2h2c gcna gcna ENSPKIP00000030772 ENSPKIP00000030772 H2BC8 H2BC8 ENSPKIP00000030657 ENSPKIP00000030657 ENSPKIP00000030577 ENSPKIP00000030577 Znrd1 Znrd1 gtf2h4 gtf2h4 polr1c polr1c LOC111836620 LOC111836620 LOC111851441 LOC111851441 taf1c taf1c ENSPKIP00000025247 ENSPKIP00000025247 tbp tbp polr1b polr1b ercc2 ercc2 LOC111841927-4 LOC111841927-4 ENSPKIP00000021454 ENSPKIP00000021454 polr1a polr1a ENSPKIP00000020812 ENSPKIP00000020812 LOC111845939 LOC111845939 ENSPKIP00000018762 ENSPKIP00000018762 tbpl1 tbpl1 ENSPKIP00000018340 ENSPKIP00000018340 ENSPKIP00000018067 ENSPKIP00000018067 polr1e polr1e ENSPKIP00000016841 ENSPKIP00000016841 polr2f polr2f ENSPKIP00000015244 ENSPKIP00000015244 taf1a taf1a ccnh ccnh ercc3 ercc3 LOC111837018 LOC111837018 LOC111846950 LOC111846950 H2AZ1 H2AZ1 LOC111841927-3 LOC111841927-3 twistnb twistnb gtf2h1 gtf2h1 LOC111833202 LOC111833202 ENSPKIP00000010023 ENSPKIP00000010023 LOC111860494 LOC111860494 gtf2h5 gtf2h5 ENSPKIP00000008065 ENSPKIP00000008065 taf1b taf1b LOC111841927-2 LOC111841927-2 polr2h polr2h LOC111841927 LOC111841927 ENSPKIP00000004111 ENSPKIP00000004111 ENSPKIP00000004039 ENSPKIP00000004039 ENSPKIP00000003984 ENSPKIP00000003984 ENSPKIP00000003821 ENSPKIP00000003821 ENSPKIP00000003747 ENSPKIP00000003747 ENSPKIP00000003629 ENSPKIP00000003629 ENSPKIP00000003555 ENSPKIP00000003555 ENSPKIP00000003502 ENSPKIP00000003502 ENSPKIP00000003332 ENSPKIP00000003332 ENSPKIP00000003264 ENSPKIP00000003264 ENSPKIP00000003127 ENSPKIP00000003127 ENSPKIP00000003094 ENSPKIP00000003094 rrn3 rrn3 LOC111838709 LOC111838709 ENSPKIP00000002486 ENSPKIP00000002486 ENSPKIP00000002266 ENSPKIP00000002266 LOC111844425 LOC111844425 ENSPKIP00000000040 ENSPKIP00000000040
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSPKIP00000038497Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (96 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (315 aa)
Polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (80 aa)
ENSPKIP00000038668Upstream binding transcription factor. (804 aa)
ENSPKIP00000038554Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
ENSPKIP00000038535Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (95 aa)
LOC111841575Upstream binding transcription factor, like. (717 aa)
ENSPKIP00000038408Histone H2B; Belongs to the histone H2B family. (203 aa)
ENSPKIP00000038374Histone H2B; Belongs to the histone H2B family. (118 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (348 aa)
gtf2h2cGeneral transcription factor IIH subunit. (407 aa)
gcnaGerm cell nuclear acidic peptidase. (579 aa)
ENSPKIP00000030772Histone H3; Belongs to the histone H3 family. (98 aa)
H2BC8Histone domain-containing protein; Belongs to the histone H2B family. (117 aa)
ENSPKIP00000030657Histone H3; Belongs to the histone H3 family. (98 aa)
ENSPKIP00000030577Histone H2B; Belongs to the histone H2B family. (113 aa)
Znrd1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
polr1cRNA polymerase I and III subunit C. (347 aa)
LOC111836620RNA polymerase II subunit E. (222 aa)
LOC111851441Histone H2A; Belongs to the histone H2A family. (142 aa)
taf1cWu:fj64h06. (971 aa)
ENSPKIP00000025247Histone H2A; Belongs to the histone H2A family. (141 aa)
tbpTATA box binding protein. (303 aa)
polr1bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1134 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
LOC111841927-4Histone H3.3. (136 aa)
ENSPKIP00000021454Uncharacterized protein. (67 aa)
polr1aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1700 aa)
ENSPKIP00000020812Uncharacterized protein. (225 aa)
LOC111845939Histone H2B; Belongs to the histone H2B family. (117 aa)
ENSPKIP00000018762Histone H2A; Belongs to the histone H2A family. (141 aa)
tbpl1TBP-like 1. (186 aa)
ENSPKIP00000018340Histone H2B; Belongs to the histone H2B family. (108 aa)
ENSPKIP00000018067Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (89 aa)
polr1eRNA polymerase I subunit E. (420 aa)
ENSPKIP00000016841Histone H2A; Belongs to the histone H2A family. (186 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ENSPKIP00000015244Histone domain-containing protein. (169 aa)
taf1aTATA box binding protein (TBP)-associated factor, RNA polymerase I, A. (534 aa)
ccnhCyclin H; Belongs to the cyclin family. (325 aa)
ercc3Excision repair cross-complementation group 3. (786 aa)
LOC111837018TATA box binding protein like 2. (316 aa)
LOC111846950Chromobox homolog 3a (HP1 gamma homolog, Drosophila). (173 aa)
H2AZ1Histone H2A; Belongs to the histone H2A family. (128 aa)
LOC111841927-3Histone H3.3. (136 aa)
twistnbTWIST neighbor. (368 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (544 aa)
LOC111833202Upstream binding transcription factor. (741 aa)
ENSPKIP00000010023Histone H3; Belongs to the histone H3 family. (138 aa)
LOC111860494RNA polymerase II subunit E. (210 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
ENSPKIP00000008065General transcription factor IIH, polypeptide 3. (293 aa)
taf1bTATA box binding protein (Tbp)-associated factor, RNA polymerase I, B. (578 aa)
LOC111841927-2Histone H3.3. (136 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC111841927Histone H3; Belongs to the histone H3 family. (136 aa)
ENSPKIP00000004111Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (86 aa)
ENSPKIP00000004039Histone H2B; Belongs to the histone H2B family. (67 aa)
ENSPKIP00000003984Histone H2A; Belongs to the histone H2A family. (137 aa)
ENSPKIP00000003821Histone H2A; Belongs to the histone H2A family. (127 aa)
ENSPKIP00000003747Histone H3; Belongs to the histone H3 family. (97 aa)
ENSPKIP00000003629Histone H2B; Belongs to the histone H2B family. (164 aa)
ENSPKIP00000003555Histone H2A; Belongs to the histone H2A family. (129 aa)
ENSPKIP00000003502Histone domain-containing protein. (89 aa)
ENSPKIP00000003332Histone H3; Belongs to the histone H3 family. (99 aa)
ENSPKIP00000003264Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
ENSPKIP00000003127Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
ENSPKIP00000003094Histone H2B; Belongs to the histone H2B family. (116 aa)
rrn3RRN3 homolog, RNA polymerase I transcription factor. (644 aa)
LOC111838709Histone H3; Belongs to the histone H3 family. (136 aa)
ENSPKIP00000002486Histone H2A; Belongs to the histone H2A family. (131 aa)
ENSPKIP00000002266Histone H3; Belongs to the histone H3 family. (97 aa)
LOC111844425Histone H2B; Belongs to the histone H2B family. (124 aa)
ENSPKIP00000000040Histone H2A; Belongs to the histone H2A family. (130 aa)
Your Current Organism:
Paramormyrops kingsleyae
NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.