STRINGSTRING
polr1b polr1b ENSPKIP00000001658 ENSPKIP00000001658 polr2h polr2h taf1b taf1b ENSPKIP00000008065 ENSPKIP00000008065 gtf2h5 gtf2h5 LOC111860494 LOC111860494 LOC111833202 LOC111833202 gtf2h1 gtf2h1 twistnb twistnb ENSPKIP00000013553 ENSPKIP00000013553 LOC111837018 LOC111837018 ercc3 ercc3 ccnh ccnh taf1a taf1a polr2f polr2f polr1e polr1e ENSPKIP00000020812 ENSPKIP00000020812 polr1a polr1a ENSPKIP00000021454 ENSPKIP00000021454 LOC111842680 LOC111842680 ercc2 ercc2 mnat1 mnat1 Polr2l Polr2l ENSPKIP00000038668 ENSPKIP00000038668 LOC111841575 LOC111841575 cdk7 cdk7 gtf2h2c gtf2h2c Znrd1 Znrd1 gtf2h4 gtf2h4 polr1c polr1c LOC111836620 LOC111836620 taf1c taf1c tbp tbp
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
polr1bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1134 aa)
ENSPKIP00000001658Caveolae associated protein 1a. (391 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
taf1bTATA box binding protein (Tbp)-associated factor, RNA polymerase I, B. (578 aa)
ENSPKIP00000008065General transcription factor IIH, polypeptide 3. (293 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
LOC111860494RNA polymerase II subunit E. (210 aa)
LOC111833202Upstream binding transcription factor. (741 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (544 aa)
twistnbTWIST neighbor. (368 aa)
ENSPKIP00000013553Caveolae associated protein 1b. (344 aa)
LOC111837018TATA box binding protein like 2. (316 aa)
ercc3Excision repair cross-complementation group 3. (786 aa)
ccnhCyclin H; Belongs to the cyclin family. (325 aa)
taf1aTATA box binding protein (TBP)-associated factor, RNA polymerase I, A. (534 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
polr1eRNA polymerase I subunit E. (420 aa)
ENSPKIP00000020812Uncharacterized protein. (225 aa)
polr1aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1700 aa)
ENSPKIP00000021454Uncharacterized protein. (67 aa)
LOC111842680Si:ch73-37h15.2. (618 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (315 aa)
Polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (80 aa)
ENSPKIP00000038668Upstream binding transcription factor. (804 aa)
LOC111841575Upstream binding transcription factor, like. (717 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (348 aa)
gtf2h2cGeneral transcription factor IIH subunit. (407 aa)
Znrd1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
polr1cRNA polymerase I and III subunit C. (347 aa)
LOC111836620RNA polymerase II subunit E. (222 aa)
taf1cWu:fj64h06. (971 aa)
tbpTATA box binding protein. (303 aa)
Your Current Organism:
Paramormyrops kingsleyae
NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae
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