34 items (Paramormyrops kingsleyae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

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protein homology

Your Input:
	ENSPKIP00000021454	Uncharacterized protein. (67 aa)
	spag7	Sperm associated antigen 7. (271 aa)
	ENSPKIP00000021292	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1851 aa)
	polr2c	Polymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
	polr2h	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
	ENSPKIP00000008065	General transcription factor IIH, polypeptide 3. (293 aa)
	gtf2f1	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (534 aa)
	polr2f	Polymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
	ccnh	Cyclin H; Belongs to the cyclin family. (325 aa)
	ercc3	Excision repair cross-complementation group 3. (786 aa)
	polr2i	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
	Polr2g	Polymerase (RNA) II (DNA directed) polypeptide G-like. (198 aa)
	rnmt	mRNA cap guanine-N7 methyltransferase. (386 aa)
	polr2b	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1231 aa)
	mnat1	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (315 aa)
	Polr2l	Polymerase (RNA) II (DNA directed) polypeptide L. (80 aa)
	rngtt	Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (636 aa)
	cdk7	Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (348 aa)
	gtf2h2c	General transcription factor IIH subunit. (407 aa)
	gtf2h5	General transcription factor IIH, polypeptide 5. (71 aa)
	LOC111860494	RNA polymerase II subunit E. (210 aa)
	gtf2h1	General transcription factor IIH, polypeptide 1. (544 aa)
	LOC111843713	Si:dkeyp-115e12.6. (2067 aa)
	Gtf2f2	General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (276 aa)
	polr2j	RNA_pol_L_2 domain-containing protein. (145 aa)
	polr2d	Polymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
	gtf2h4	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
	ENSPKIP00000030381	Uncharacterized protein. (281 aa)
	ENSPKIP00000030006	Uncharacterized protein. (127 aa)
	LOC111836620	RNA polymerase II subunit E. (222 aa)
	ENSPKIP00000024903	Uncharacterized protein. (319 aa)
	Dusp11	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting). (256 aa)
	ercc2	Excision repair cross-complementation group 2. (760 aa)
	supt5h	Transcription elongation factor SPT5. (1083 aa)

Your Current Organism:

Paramormyrops kingsleyae

NCBI taxonomy Id: 1676925
Other names: Brienomyrus kingsleyae, Brienomyrus sp. CAB, Mormyrus kingsleyae, P. kingsleyae, Pollimyrus kingsleyae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Dusp11	ENSPKIP00000008065	ENSPKIP00000024147	ENSPKIP00000008065	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	General transcription factor IIH, polypeptide 3.	0.668
Dusp11	ENSPKIP00000021292	ENSPKIP00000024147	ENSPKIP00000021292	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.643
Dusp11	ENSPKIP00000024903	ENSPKIP00000024147	ENSPKIP00000024903	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	Uncharacterized protein.	0.643
Dusp11	ENSPKIP00000030006	ENSPKIP00000024147	ENSPKIP00000030006	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	Uncharacterized protein.	0.800
Dusp11	ENSPKIP00000030381	ENSPKIP00000024147	ENSPKIP00000030381	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	Uncharacterized protein.	0.800
Dusp11	LOC111836620	ENSPKIP00000024147	ENSPKIP00000027631	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	RNA polymerase II subunit E.	0.623
Dusp11	LOC111843713	ENSPKIP00000024147	ENSPKIP00000034730	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	Si:dkeyp-115e12.6.	0.800
Dusp11	LOC111860494	ENSPKIP00000024147	ENSPKIP00000008773	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	RNA polymerase II subunit E.	0.623
Dusp11	Polr2g	ENSPKIP00000024147	ENSPKIP00000013477	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	Polymerase (RNA) II (DNA directed) polypeptide G-like.	0.780
Dusp11	Polr2l	ENSPKIP00000024147	ENSPKIP00000041408	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	Polymerase (RNA) II (DNA directed) polypeptide L.	0.685
Dusp11	cdk7	ENSPKIP00000024147	ENSPKIP00000037989	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily.	0.565
Dusp11	gtf2f1	ENSPKIP00000024147	ENSPKIP00000018737	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.661
Dusp11	gtf2h2c	ENSPKIP00000024147	ENSPKIP00000035836	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	General transcription factor IIH subunit.	0.659
Dusp11	mnat1	ENSPKIP00000024147	ENSPKIP00000041747	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	0.724
Dusp11	polr2b	ENSPKIP00000024147	ENSPKIP00000012104	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.695
Dusp11	polr2c	ENSPKIP00000024147	ENSPKIP00000020454	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	Polymerase (RNA) II (DNA directed) polypeptide C.	0.814
Dusp11	polr2d	ENSPKIP00000024147	ENSPKIP00000031841	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	Polymerase (RNA) II (DNA directed) polypeptide D.	0.774
Dusp11	polr2f	ENSPKIP00000024147	ENSPKIP00000015932	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	Polymerase (RNA) II (DNA directed) polypeptide F.	0.672
Dusp11	polr2h	ENSPKIP00000024147	ENSPKIP00000006640	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.662
Dusp11	polr2i	ENSPKIP00000024147	ENSPKIP00000013788	Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting).	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.703