(6 nodes) Mixed, incl. Alpha/beta hydrolase fold-3, and FAD-binding domain network (Bacillus sp. MUM116)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OIK13403.1	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
	BIV60_19565	Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	OIK10848.1	Short chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
	OIK10849.1	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (541 aa)
	OIK10873.1	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
	OIK08833.1	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)

Your Current Organism:

Bacillus sp. MUM116

NCBI taxonomy Id: 1678002
Other names: B. sp. MUM 116, Bacillus sp. MUM 116

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BIV60_19565	OIK08833.1	BIV60_19565	BIV60_25495	Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.654
BIV60_19565	OIK10848.1	BIV60_19565	BIV60_19570	Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.548
BIV60_19565	OIK10849.1	BIV60_19565	BIV60_19575	Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
OIK08833.1	BIV60_19565	BIV60_25495	BIV60_19565	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.654
OIK08833.1	OIK10849.1	BIV60_25495	BIV60_19575	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.803
OIK08833.1	OIK10873.1	BIV60_25495	BIV60_19710	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.743
OIK08833.1	OIK13403.1	BIV60_25495	BIV60_14080	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
OIK10848.1	BIV60_19565	BIV60_19570	BIV60_19565	Short chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.548
OIK10848.1	OIK10849.1	BIV60_19570	BIV60_19575	Short chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
OIK10849.1	BIV60_19565	BIV60_19575	BIV60_19565	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
OIK10849.1	OIK08833.1	BIV60_19575	BIV60_25495	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.803
OIK10849.1	OIK10848.1	BIV60_19575	BIV60_19570	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
OIK10849.1	OIK10873.1	BIV60_19575	BIV60_19710	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
OIK10849.1	OIK13403.1	BIV60_19575	BIV60_14080	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.590
OIK10873.1	OIK08833.1	BIV60_19710	BIV60_25495	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.743
OIK10873.1	OIK10849.1	BIV60_19710	BIV60_19575	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
OIK10873.1	OIK13403.1	BIV60_19710	BIV60_14080	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
OIK13403.1	OIK08833.1	BIV60_14080	BIV60_25495	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
OIK13403.1	OIK10849.1	BIV60_14080	BIV60_19575	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.590
OIK13403.1	OIK10873.1	BIV60_14080	BIV60_19710	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412