STRINGSTRING
araA araA AC062_0239 AC062_0239 AC062_0240 AC062_0240 AC062_0241 AC062_0241 araG araG AC062_0243 AC062_0243 AC062_0358 AC062_0358 AC062_0359 AC062_0359 AC062_0360 AC062_0360 rbsD rbsD rbsA rbsA AC062_0998 AC062_0998 AC062_0999 AC062_0999 rbsK rbsK AC062_1001 AC062_1001 AC062_1164 AC062_1164 AC062_1165 AC062_1165 AC062_1166 AC062_1166 AC062_1167 AC062_1167 AC062_1168 AC062_1168 AC062_1217 AC062_1217 AC062_1218 AC062_1218 AC062_1219 AC062_1219 xylG xylG AC062_1221 AC062_1221 xylA xylA xylB xylB AC062_1432 AC062_1432 AC062_1433 AC062_1433 AC062_1434 AC062_1434 rbsA-2 rbsA-2 AC062_2293 AC062_2293 AC062_2294 AC062_2294
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
araAL-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (495 aa)
AC062_0239Ribulokinase. (536 aa)
AC062_0240Arabinose operon regulatory protein. (285 aa)
AC062_0241L-arabinose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (322 aa)
araGL-arabinose transport ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. (505 aa)
AC062_0243L-arabinose-binding periplasmic protein precursor AraF. (333 aa)
AC062_0358Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB. (330 aa)
AC062_0359Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA. (506 aa)
AC062_0360Galactose/methyl galactoside ABC transport system, permease protein MglC. (336 aa)
rbsDRibose ABC transport system, high affinity permease RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (139 aa)
rbsARibose ABC transport system, ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (493 aa)
AC062_0998Ribose ABC transport system, permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (322 aa)
AC062_0999Ribose ABC transport system, periplasmic ribose-binding protein RbsB. (296 aa)
rbsKRibokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (305 aa)
AC062_1001Ribose operon repressor. (338 aa)
AC062_1164Deoxyribose operon repressor, DeoR family. (250 aa)
AC062_1165L-xylulose/3-keto-L-gulonate kinase; Belongs to the FGGY kinase family. (483 aa)
AC062_1166Ribose ABC transport system, permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (343 aa)
AC062_1167Ribose ABC transport system, ATP-binding protein RbsA. (497 aa)
AC062_1168Ribose ABC transport system, periplasmic ribose-binding protein RbsB. (313 aa)
AC062_1217Hexose phosphate uptake regulatory protein UhpC. (441 aa)
AC062_1218Xylose activator XylR (AraC family). (387 aa)
AC062_1219Xylose ABC transporter, permease protein XylH; Belongs to the binding-protein-dependent transport system permease family. (375 aa)
xylGD-xylose transport ATP-binding protein XylG; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (503 aa)
AC062_1221Xylose ABC transporter, periplasmic xylose-binding protein XylF. (332 aa)
xylAXylose isomerase; Belongs to the xylose isomerase family. (439 aa)
xylBXylulose kinase. (507 aa)
AC062_1432Inositol transport system permease protein. (317 aa)
AC062_1433Inositol transport system ATP-binding protein. (501 aa)
AC062_1434Inositol transport system sugar-binding protein. (312 aa)
rbsA-2ABC transport system, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (503 aa)
AC062_2293ABC transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family. (323 aa)
AC062_2294ABC transport system, periplasmic substrate-binding protein. (309 aa)
Your Current Organism:
Pasteurellaceae bacterium NI1060
NCBI taxonomy Id: 1679001
Other names: P. bacterium NI1060
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