STRINGSTRING
AMK57510.1 AMK57510.1 nth nth AMK57426.1 AMK57426.1 AMK58341.1 AMK58341.1 glgX-2 glgX-2 AMK58239.1 AMK58239.1 AMK57045.1 AMK57045.1 pulA pulA AMK58010.1 AMK58010.1 AMK57745.1 AMK57745.1 glgX glgX ung ung AMK57420.1 AMK57420.1 AMK57421.1 AMK57421.1 Bang102_006795 Bang102_006795 AMK57664.1 AMK57664.1 AMK57659.1 AMK57659.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMK57510.1Arabinofuranohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (529 aa)
nthEndonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (207 aa)
AMK57426.1Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (690 aa)
AMK58341.1Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
glgX-2Glycogen debranching enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family. (706 aa)
AMK58239.1Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family. (854 aa)
AMK57045.1Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family. (751 aa)
pulAPullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1755 aa)
AMK58010.1Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (757 aa)
AMK57745.1Beta-(1-2)-fructofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 32 family. (518 aa)
glgXGlycogen debranching enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family. (865 aa)
unguracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (232 aa)
AMK57420.1Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (647 aa)
AMK57421.1Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
Bang102_006795Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (338 aa)
AMK57664.1Beta-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (543 aa)
AMK57659.1alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (565 aa)
Your Current Organism:
Bifidobacterium angulatum
NCBI taxonomy Id: 1683
Other names: AS 1.2265, ATCC 27535, B. angulatum, BCRC 14665, CCRC 14665, CCRC:14665, CCUG 24039, CCUG 24605, CIP 104167, DSM 20098, JCM 7096, LMG 10503, LMG 11039, LMG:10503, LMG:11039, NCFB 2236, NCIMB 702236
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