11 items (Pseudomicrostroma glucosiphilum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A316TWT8	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1220 aa)
	A0A316TZY8	Ras-domain-containing protein. (251 aa)
	A0A316TZZ9	RhoGAP-domain-containing protein. (1530 aa)
	A0A316U2N7	Uncharacterized protein. (194 aa)
	A0A316U933	Uncharacterized protein. (193 aa)
	A0A316U987	RhoGAP-domain-containing protein. (979 aa)
	A0A316U990	Uncharacterized protein. (148 aa)
	A0A316U9C6	RhoGAP-domain-containing protein. (1290 aa)
	A0A316UAR7	RhoGAP-domain-containing protein. (1374 aa)
	A0A316UCE7	Rho GTPase activation protein. (478 aa)
	A0A316UFI8	Putative rho GDP dissociation inhibitor. (199 aa)

Your Current Organism:

Pseudomicrostroma glucosiphilum

NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316TWT8	A0A316TZY8	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Ras-domain-containing protein.	0.901
A0A316TWT8	A0A316TZZ9	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	RhoGAP-domain-containing protein.	0.533
A0A316TWT8	A0A316U2N7	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.993
A0A316TWT8	A0A316U933	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.881
A0A316TWT8	A0A316U987	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	RhoGAP-domain-containing protein.	0.402
A0A316TWT8	A0A316U990	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.908
A0A316TWT8	A0A316U9C6	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	RhoGAP-domain-containing protein.	0.751
A0A316TWT8	A0A316UAR7	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	RhoGAP-domain-containing protein.	0.730
A0A316TWT8	A0A316UCE7	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Rho GTPase activation protein.	0.616
A0A316TZY8	A0A316TWT8	Ras-domain-containing protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.901
A0A316TZY8	A0A316TZZ9	Ras-domain-containing protein.	RhoGAP-domain-containing protein.	0.692
A0A316TZY8	A0A316U2N7	Ras-domain-containing protein.	Uncharacterized protein.	0.698
A0A316TZY8	A0A316U933	Ras-domain-containing protein.	Uncharacterized protein.	0.769
A0A316TZY8	A0A316U987	Ras-domain-containing protein.	RhoGAP-domain-containing protein.	0.797
A0A316TZY8	A0A316U990	Ras-domain-containing protein.	Uncharacterized protein.	0.847
A0A316TZY8	A0A316U9C6	Ras-domain-containing protein.	RhoGAP-domain-containing protein.	0.991
A0A316TZY8	A0A316UAR7	Ras-domain-containing protein.	RhoGAP-domain-containing protein.	0.999
A0A316TZY8	A0A316UCE7	Ras-domain-containing protein.	Rho GTPase activation protein.	0.850
A0A316TZY8	A0A316UFI8	Ras-domain-containing protein.	Putative rho GDP dissociation inhibitor.	0.924
A0A316TZZ9	A0A316TWT8	RhoGAP-domain-containing protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.533