12 items (Pseudomicrostroma glucosiphilum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	A0A316U0F7	TFIIS N-terminal domain-containing protein. (455 aa)
	A0A316U0H1	Uncharacterized protein. (1428 aa)
	A0A316U0P9	Uncharacterized protein. (906 aa)
	A0A316U2E5	Uncharacterized protein. (1122 aa)
	A0A316U3R4	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
	A0A316U468	Plus3 domain-containing protein. (560 aa)
	A0A316U525	Uncharacterized protein. (501 aa)
	A0A316U941	Transcription elongation factor. (332 aa)
	A0A316UAC5	CDC73-domain-containing protein. (500 aa)
	A0A316UCX1	Leo1-domain-containing protein. (396 aa)
	A0A316UFX4	CID domain-containing protein. (703 aa)
	A0A316UKT3	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (103 aa)

Your Current Organism:

Pseudomicrostroma glucosiphilum

NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316U0F7	A0A316U0H1	TFIIS N-terminal domain-containing protein.	Uncharacterized protein.	0.891
A0A316U0F7	A0A316U3R4	TFIIS N-terminal domain-containing protein.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.837
A0A316U0F7	A0A316U468	TFIIS N-terminal domain-containing protein.	Plus3 domain-containing protein.	0.810
A0A316U0F7	A0A316U525	TFIIS N-terminal domain-containing protein.	Uncharacterized protein.	0.638
A0A316U0F7	A0A316U941	TFIIS N-terminal domain-containing protein.	Transcription elongation factor.	0.916
A0A316U0F7	A0A316UAC5	TFIIS N-terminal domain-containing protein.	CDC73-domain-containing protein.	0.675
A0A316U0F7	A0A316UCX1	TFIIS N-terminal domain-containing protein.	Leo1-domain-containing protein.	0.877
A0A316U0F7	A0A316UKT3	TFIIS N-terminal domain-containing protein.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.888
A0A316U0H1	A0A316U0F7	Uncharacterized protein.	TFIIS N-terminal domain-containing protein.	0.891
A0A316U0H1	A0A316U3R4	Uncharacterized protein.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.683
A0A316U0H1	A0A316U468	Uncharacterized protein.	Plus3 domain-containing protein.	0.995
A0A316U0H1	A0A316U525	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A316U0H1	A0A316U941	Uncharacterized protein.	Transcription elongation factor.	0.807
A0A316U0H1	A0A316UAC5	Uncharacterized protein.	CDC73-domain-containing protein.	0.997
A0A316U0H1	A0A316UCX1	Uncharacterized protein.	Leo1-domain-containing protein.	0.997
A0A316U0H1	A0A316UFX4	Uncharacterized protein.	CID domain-containing protein.	0.613
A0A316U0H1	A0A316UKT3	Uncharacterized protein.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.955
A0A316U0P9	A0A316U2E5	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A316U0P9	A0A316U941	Uncharacterized protein.	Transcription elongation factor.	0.890
A0A316U0P9	A0A316UFX4	Uncharacterized protein.	CID domain-containing protein.	0.629