STRINGSTRING
A0A316UDX6 A0A316UDX6 A0A316UDZ8 A0A316UDZ8 A0A316UE43 A0A316UE43 A0A316UEE9 A0A316UEE9 A0A316UEV6 A0A316UEV6 SUS1 SUS1 A0A316UFG5 A0A316UFG5 A0A316UFM3 A0A316UFM3 A0A316UFX4 A0A316UFX4 A0A316UGA3 A0A316UGA3 A0A316UGE1 A0A316UGE1 A0A316UGL8 A0A316UGL8 A0A316UGS1 A0A316UGS1 A0A316UHF7 A0A316UHF7 A0A316UJ25 A0A316UJ25 A0A316UJB5 A0A316UJB5 A0A316UJZ7 A0A316UJZ7 A0A316UAF2 A0A316UAF2 A0A316UAQ1 A0A316UAQ1 A0A316UAY4 A0A316UAY4 A0A316UB06 A0A316UB06 A0A316UBJ8 A0A316UBJ8 A0A316UBP5 A0A316UBP5 A0A316UCF7 A0A316UCF7 A0A316UCU3 A0A316UCU3 A0A316UCU4 A0A316UCU4 A0A316UCV3 A0A316UCV3 A0A316UCX1 A0A316UCX1 A0A316UD53 A0A316UD53 A0A316UDE8 A0A316UDE8 A0A316UDF5 A0A316UDF5 A0A316UDK0 A0A316UDK0 A0A316TXW2 A0A316TXW2 A0A316TY24 A0A316TY24 A0A316TZR9 A0A316TZR9 A0A316TZT4 A0A316TZT4 A0A316U020 A0A316U020 A0A316U0A7 A0A316U0A7 A0A316U0H1 A0A316U0H1 A0A316U0P9 A0A316U0P9 A0A316U0R2 A0A316U0R2 A0A316U0Y8 A0A316U0Y8 A0A316U159 A0A316U159 A0A316U169 A0A316U169 A0A316U2A6 A0A316U2A6 A0A316U2E5 A0A316U2E5 A0A316U2H0 A0A316U2H0 A0A316U2S0 A0A316U2S0 A0A316U2S2 A0A316U2S2 A0A316U3R4 A0A316U3R4 A0A316U3S5 A0A316U3S5 A0A316U468 A0A316U468 A0A316U4T4 A0A316U4T4 A0A316U4Z7 A0A316U4Z7 A0A316U525 A0A316U525 A0A316U577 A0A316U577 A0A316U5A0 A0A316U5A0 A0A316U5I8 A0A316U5I8 A0A316U5K9 A0A316U5K9 A0A316U5T1 A0A316U5T1 A0A316U5Y7 A0A316U5Y7 A0A316U602 A0A316U602 A0A316U6E4 A0A316U6E4 A0A316U7A9 A0A316U7A9 A0A316U7G6 A0A316U7G6 A0A316U854 A0A316U854 A0A316U856 A0A316U856 A0A316U941 A0A316U941 A0A316U950 A0A316U950 A0A316U9I9 A0A316U9I9 A0A316U9M3 A0A316U9M3 A0A316U9R1 A0A316U9R1 A0A316U9V0 A0A316U9V0 A0A316U9X9 A0A316U9X9 A0A316UA79 A0A316UA79 A0A316UAC5 A0A316UAC5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A316UDX6WD40 repeat-like protein. (936 aa)
A0A316UDZ8Histone-fold-containing protein. (146 aa)
A0A316UE43Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1201 aa)
A0A316UEE9Endo/exonuclease/phosphatase domain-containing protein. (796 aa)
A0A316UEV6Uncharacterized protein. (695 aa)
SUS1Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] (103 aa)
A0A316UFG5TFIID-31kDa-domain-containing protein. (218 aa)
A0A316UFM3Uncharacterized protein. (2201 aa)
A0A316UFX4CID domain-containing protein. (703 aa)
A0A316UGA3RPOL4c domain-containing protein. (166 aa)
A0A316UGE1Uncharacterized protein. (85 aa)
A0A316UGL8DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (133 aa)
A0A316UGS1Uncharacterized protein. (1757 aa)
A0A316UHF7Ssu72-like protein. (231 aa)
A0A316UJ25Putative DNA-directed RNA polymerase II chain RPB10. (70 aa)
A0A316UJB5Bromodomain-containing protein. (931 aa)
A0A316UJZ7Insert subdomain of RNA polymerase alpha subunit. (281 aa)
A0A316UAF2BAH domain-containing protein. (836 aa)
A0A316UAQ1DUF1014-domain-containing protein. (229 aa)
A0A316UAY4Uncharacterized protein. (861 aa)
A0A316UB06DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1801 aa)
A0A316UBJ8Pkinase-domain-containing protein; Belongs to the protein kinase superfamily. (430 aa)
A0A316UBP5TFIID_20kDa domain-containing protein. (687 aa)
A0A316UCF7Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (261 aa)
A0A316UCU3Pkinase-domain-containing protein; Belongs to the protein kinase superfamily. (333 aa)
A0A316UCU4Transcription initiation factor TFIID-1. (244 aa)
A0A316UCV3Uncharacterized protein. (87 aa)
A0A316UCX1Leo1-domain-containing protein. (396 aa)
A0A316UD53Putative 25 kd subunit of DNA-directed RNA polymerases I, II and III. (207 aa)
A0A316UDE8Uncharacterized protein. (465 aa)
A0A316UDF5TFIID-18kDa-domain-containing protein. (188 aa)
A0A316UDK0DNA repair helicase rad25. (914 aa)
A0A316TXW2Uncharacterized protein. (504 aa)
A0A316TY24Uncharacterized protein. (254 aa)
A0A316TZR9Uncharacterized protein. (65 aa)
A0A316TZT4Putative ISW2-ATPase component of a two subunit chromatin remodeling complex. (1124 aa)
A0A316U020Uncharacterized protein. (242 aa)
A0A316U0A7Uncharacterized protein. (2220 aa)
A0A316U0H1Uncharacterized protein. (1428 aa)
A0A316U0P9Uncharacterized protein. (906 aa)
A0A316U0R2Cyclin-like protein. (417 aa)
A0A316U0Y8RNase_PH domain-containing protein. (314 aa)
A0A316U159Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (250 aa)
A0A316U169TFIID-18kDa-domain-containing protein. (549 aa)
A0A316U2A6Putative RAD3-DNA helicase/ATPase. (853 aa)
A0A316U2E5Uncharacterized protein. (1122 aa)
A0A316U2H0Pkinase-domain-containing protein; Belongs to the protein kinase superfamily. (433 aa)
A0A316U2S0Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (119 aa)
A0A316U2S2RNA polymerase Rpb6. (160 aa)
A0A316U3R4Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
A0A316U3S5DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1252 aa)
A0A316U468Plus3 domain-containing protein. (560 aa)
A0A316U4T4Putative SPT16-general chromatin factor. (1030 aa)
A0A316U4Z7Uncharacterized protein. (923 aa)
A0A316U525Uncharacterized protein. (501 aa)
A0A316U577General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (530 aa)
A0A316U5A0Histone-fold-containing protein. (92 aa)
A0A316U5I8TAF domain-containing protein. (535 aa)
A0A316U5K9PHD-type domain-containing protein. (1121 aa)
A0A316U5T1TAFII55_N domain-containing protein. (757 aa)
A0A316U5Y7Uncharacterized protein. (422 aa)
A0A316U602Uncharacterized protein. (680 aa)
A0A316U6E4Uncharacterized protein. (640 aa)
A0A316U7A9RNA-binding region RNP-1. (86 aa)
A0A316U7G6TAFII28-domain-containing protein. (314 aa)
A0A316U854RBP11-like subunits of RNA polymerase. (201 aa)
A0A316U856Uncharacterized protein. (175 aa)
A0A316U941Transcription elongation factor. (332 aa)
A0A316U950Uncharacterized protein. (508 aa)
A0A316U9I9TFIIE domain-containing protein. (443 aa)
A0A316U9M3Transcription factor Tfb4. (385 aa)
A0A316U9R1DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (152 aa)
A0A316U9V0Uncharacterized protein. (1528 aa)
A0A316U9X9P-loop containing nucleoside triphosphate hydrolase protein. (1156 aa)
A0A316UA79Uncharacterized protein. (1779 aa)
A0A316UAC5CDC73-domain-containing protein. (500 aa)
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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