38 items (Pseudomicrostroma glucosiphilum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A316U6I9	Histone H2B; Belongs to the histone H2B family. (144 aa)
	A0A316U123	Rad21_Rec8_N domain-containing protein. (338 aa)
	A0A316U2F2	Rad21_Rec8 domain-containing protein. (166 aa)
	A0A316U313	P-loop containing nucleoside triphosphate hydrolase protein. (931 aa)
	A0A316U341	Structural maintenance of chromosomes protein. (1272 aa)
	A0A316U407	SWIB domain-containing protein. (569 aa)
	A0A316U494	Uncharacterized protein. (810 aa)
	A0A316U4D1	Amine oxidase. (577 aa)
	A0A316U558	Uncharacterized protein. (1002 aa)
	A0A316U585	Histone H2A; Belongs to the histone H2A family. (150 aa)
	A0A316TZL6	Bromo domain-containing protein. (595 aa)
	A0A316U772	Structural maintenance of chromosomes protein. (1222 aa)
	A0A316U7B1	ARID domain-containing protein. (1455 aa)
	A0A316U7J7	Uncharacterized protein. (315 aa)
	A0A316U7M7	H15 domain-containing protein. (158 aa)
	A0A316U7P2	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	A0A316U8N8	Histone H2A; Belongs to the histone H2A family. (129 aa)
	A0A316U930	Histone-fold-containing protein. (155 aa)
	A0A316U9C8	Histone H3; Belongs to the histone H3 family. (136 aa)
	A0A316U9Y1	ARM repeat-containing protein. (1536 aa)
	A0A316UA17	SCD domain-containing protein. (1504 aa)
	A0A316UAF2	BAH domain-containing protein. (836 aa)
	A0A316UAZ6	Uncharacterized protein. (1064 aa)
	A0A316UB80	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (602 aa)
	A0A316UCS1	SNF5-domain-containing protein. (256 aa)
	A0A316UCW9	Uncharacterized protein. (1484 aa)
	A0A316UCY6	Spc7 domain-containing protein. (1135 aa)
	A0A316UDF7	Histone H3; Belongs to the histone H3 family. (136 aa)
	A0A316UDH4	DUF2236 domain-containing protein. (676 aa)
	A0A316UDN4	SMC hinge domain-containing protein. (1655 aa)
	A0A316UE39	Structural maintenance of chromosomes protein. (1204 aa)
	A0A316UE71	DUF5595 domain-containing protein. (716 aa)
	A0A316UFF0	Actin/actin-like protein; Belongs to the actin family. (508 aa)
	A0A316UFR6	ARM repeat-containing protein. (1082 aa)
	A0A316UG16	Uncharacterized protein. (657 aa)
	A0A316UGD1	Uncharacterized protein. (722 aa)
	A0A316UIA6	Barren-domain-containing protein. (1058 aa)
	A0A316UJB5	Bromodomain-containing protein. (931 aa)

Your Current Organism:

Pseudomicrostroma glucosiphilum

NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316TZL6	A0A316U585	Bromo domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.764
A0A316TZL6	A0A316U6I9	Bromo domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.578
A0A316TZL6	A0A316U7P2	Bromo domain-containing protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.418
A0A316TZL6	A0A316U8N8	Bromo domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.419
A0A316TZL6	A0A316U930	Bromo domain-containing protein.	Histone-fold-containing protein.	0.619
A0A316TZL6	A0A316U9C8	Bromo domain-containing protein.	Histone H3; Belongs to the histone H3 family.	0.619
A0A316TZL6	A0A316UB80	Bromo domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.689
A0A316TZL6	A0A316UDF7	Bromo domain-containing protein.	Histone H3; Belongs to the histone H3 family.	0.619
A0A316TZL6	A0A316UDH4	Bromo domain-containing protein.	DUF2236 domain-containing protein.	0.619
A0A316TZL6	A0A316UFF0	Bromo domain-containing protein.	Actin/actin-like protein; Belongs to the actin family.	0.774
A0A316TZL6	A0A316UGD1	Bromo domain-containing protein.	Uncharacterized protein.	0.437
A0A316U123	A0A316U341	Rad21_Rec8_N domain-containing protein.	Structural maintenance of chromosomes protein.	0.933
A0A316U123	A0A316U772	Rad21_Rec8_N domain-containing protein.	Structural maintenance of chromosomes protein.	0.803
A0A316U123	A0A316UA17	Rad21_Rec8_N domain-containing protein.	SCD domain-containing protein.	0.925
A0A316U123	A0A316UDN4	Rad21_Rec8_N domain-containing protein.	SMC hinge domain-containing protein.	0.814
A0A316U123	A0A316UE39	Rad21_Rec8_N domain-containing protein.	Structural maintenance of chromosomes protein.	0.953
A0A316U123	A0A316UG16	Rad21_Rec8_N domain-containing protein.	Uncharacterized protein.	0.634
A0A316U2F2	A0A316U341	Rad21_Rec8 domain-containing protein.	Structural maintenance of chromosomes protein.	0.933
A0A316U2F2	A0A316U772	Rad21_Rec8 domain-containing protein.	Structural maintenance of chromosomes protein.	0.803
A0A316U2F2	A0A316UA17	Rad21_Rec8 domain-containing protein.	SCD domain-containing protein.	0.925