STRINGSTRING
A0A316U5K9 A0A316U5K9 A0A316U5Y7 A0A316U5Y7 A0A316U5T1 A0A316U5T1 A0A316U7G6 A0A316U7G6 A0A316U941 A0A316U941 A0A316U2S0 A0A316U2S0 A0A316U159 A0A316U159 A0A316U0R2 A0A316U0R2 A0A316UFG5 A0A316UFG5 A0A316UDF5 A0A316UDF5 A0A316UDZ8 A0A316UDZ8 A0A316UBP5 A0A316UBP5 A0A316U2E5 A0A316U2E5 A0A316U5A0 A0A316U5A0 A0A316U5I8 A0A316U5I8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A316U5K9PHD-type domain-containing protein. (1121 aa)
A0A316U5Y7Uncharacterized protein. (422 aa)
A0A316U5T1TAFII55_N domain-containing protein. (757 aa)
A0A316U7G6TAFII28-domain-containing protein. (314 aa)
A0A316U941Transcription elongation factor. (332 aa)
A0A316U2S0Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (119 aa)
A0A316U159Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (250 aa)
A0A316U0R2Cyclin-like protein. (417 aa)
A0A316UFG5TFIID-31kDa-domain-containing protein. (218 aa)
A0A316UDF5TFIID-18kDa-domain-containing protein. (188 aa)
A0A316UDZ8Histone-fold-containing protein. (146 aa)
A0A316UBP5TFIID_20kDa domain-containing protein. (687 aa)
A0A316U2E5Uncharacterized protein. (1122 aa)
A0A316U5A0Histone-fold-containing protein. (92 aa)
A0A316U5I8TAF domain-containing protein. (535 aa)
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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