STRINGSTRING
A0A316U940 A0A316U940 A0A316UDD0 A0A316UDD0 A0A316UDC6 A0A316UDC6 A0A316UCC3 A0A316UCC3 A0A316UCD7 A0A316UCD7 A0A316UCE1 A0A316UCE1 A0A316UCF8 A0A316UCF8 A0A316UCW4 A0A316UCW4 A0A316UCY0 A0A316UCY0 A0A316UD55 A0A316UD55 A0A316UD98 A0A316UD98 A0A316UDK3 A0A316UDK3 A0A316UDL0 A0A316UDL0 A0A316UDQ1 A0A316UDQ1 A0A316UDS0 A0A316UDS0 A0A316UDT7 A0A316UDT7 A0A316UDX2 A0A316UDX2 A0A316UDZ8 A0A316UDZ8 A0A316UE43 A0A316UE43 A0A316UEA4 A0A316UEA4 A0A316UEE9 A0A316UEE9 A0A316UEH3 A0A316UEH3 A0A316UFC6 A0A316UFC6 A0A316UFE6 A0A316UFE6 A0A316UFJ8 A0A316UFJ8 A0A316UFL2 A0A316UFL2 A0A316UFN2 A0A316UFN2 A0A316UFS5 A0A316UFS5 A0A316UFU3 A0A316UFU3 A0A316UG64 A0A316UG64 A0A316UG73 A0A316UG73 A0A316UGA3 A0A316UGA3 A0A316UGC2 A0A316UGC2 A0A316UH93 A0A316UH93 A0A316UI36 A0A316UI36 A0A316UII1 A0A316UII1 A0A316UJ49 A0A316UJ49 A0A316UJK1 A0A316UJK1 A0A316UKY9 A0A316UKY9 A0A316UL86 A0A316UL86 A0A316ULG5 A0A316ULG5 A0A316UDI1 A0A316UDI1 A0A316UC46 A0A316UC46 A0A316UC21 A0A316UC21 A0A316UBW4 A0A316UBW4 A0A316UBU7 A0A316UBU7 A0A316UBT9 A0A316UBT9 A0A316UBI0 A0A316UBI0 A0A316UBH4 A0A316UBH4 A0A316UBD2 A0A316UBD2 A0A316UB94 A0A316UB94 A0A316UB80 A0A316UB80 A0A316UB56 A0A316UB56 A0A316UB21 A0A316UB21 A0A316UB04 A0A316UB04 A0A316UAZ0 A0A316UAZ0 A0A316UAX8 A0A316UAX8 A0A316U3R5 A0A316U3R5 A0A316U468 A0A316U468 A0A316U4D1 A0A316U4D1 A0A316U4L0 A0A316U4L0 A0A316U4S4 A0A316U4S4 A0A316U527 A0A316U527 PAN2 PAN2 A0A316U5A0 A0A316U5A0 A0A316U5C6 A0A316U5C6 A0A316U5G8 A0A316U5G8 A0A316U5K9 A0A316U5K9 A0A316U5N7 A0A316U5N7 A0A316TWM8 A0A316TWM8 A0A316TX56 A0A316TX56 A0A316TYH3 A0A316TYH3 A0A316TYK3 A0A316TYK3 A0A316TYW7 A0A316TYW7 A0A316TZ67 A0A316TZ67 A0A316TZK0 A0A316TZK0 A0A316UAP1 A0A316UAP1 A0A316TZK2 A0A316TZK2 A0A316U021 A0A316U021 A0A316U091 A0A316U091 A0A316U0F6 A0A316U0F6 A0A316U0G9 A0A316U0G9 A0A316U0P1 A0A316U0P1 A0A316U0R3 A0A316U0R3 A0A316U0X1 A0A316U0X1 A0A316U170 A0A316U170 A0A316U1K6 A0A316U1K6 A0A316U2V2 A0A316U2V2 A0A316U356 A0A316U356 A0A316U3R0 A0A316U3R0 A0A316U3R3 A0A316U3R3 A0A316UAL6 A0A316UAL6 A0A316UAE7 A0A316UAE7 A0A316UAC6 A0A316UAC6 A0A316UA09 A0A316UA09 A0A316U9V2 A0A316U9V2 A0A316U9K7 A0A316U9K7 A0A316U9G8 A0A316U9G8 A0A316U977 A0A316U977 A0A316U5R2 A0A316U5R2 A0A316U658 A0A316U658 A0A316U6B6 A0A316U6B6 A0A316U6U8 A0A316U6U8 A0A316U6X8 A0A316U6X8 A0A316U733 A0A316U733 A0A316U772 A0A316U772 A0A316U7A7 A0A316U7A7 A0A316U7B2 A0A316U7B2 A0A316U7H8 A0A316U7H8 A0A316U7I3 A0A316U7I3 PAN3 PAN3 A0A316U7K9 A0A316U7K9 A0A316U7M7 A0A316U7M7 LSM1 LSM1 A0A316U8A3 A0A316U8A3 A0A316U8C6 A0A316U8C6 A0A316U8J0 A0A316U8J0 A0A316U8J7 A0A316U8J7 A0A316U8N8 A0A316U8N8 A0A316U8W5 A0A316U8W5 A0A316U8X8 A0A316U8X8 A0A316U8Y3 A0A316U8Y3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A316U940WD40 repeat-like protein. (852 aa)
A0A316UDD0Ubiquitin carboxyl-terminal hydrolase. (593 aa)
A0A316UDC6WD40 repeat-like protein. (321 aa)
A0A316UCC3Cytosine-specific methyltransferase. (748 aa)
A0A316UCD7Uncharacterized protein. (1483 aa)
A0A316UCE1TPR-like protein. (1166 aa)
A0A316UCF8Uncharacterized protein. (1350 aa)
A0A316UCW4PAT1 domain-containing protein. (989 aa)
A0A316UCY0Maf1-domain-containing protein. (529 aa)
A0A316UD55DUF427-domain-containing protein. (189 aa)
A0A316UD98Uncharacterized protein. (247 aa)
A0A316UDK3GATA-domain-containing protein. (50 aa)
A0A316UDL0mRNA transport regulator 3. (292 aa)
A0A316UDQ1Uncharacterized protein. (402 aa)
A0A316UDS0RNase_PH domain-containing protein. (320 aa)
A0A316UDT7NPL4-domain-containing protein. (770 aa)
A0A316UDX2Sec39 domain-containing protein. (1170 aa)
A0A316UDZ8Histone-fold-containing protein. (146 aa)
A0A316UE43Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1201 aa)
A0A316UEA4Uncharacterized protein. (1335 aa)
A0A316UEE9Endo/exonuclease/phosphatase domain-containing protein. (796 aa)
A0A316UEH3Nefa_Nip30_N domain-containing protein. (229 aa)
A0A316UFC6Uncharacterized protein. (807 aa)
A0A316UFE6Glycosyl transferase. (381 aa)
A0A316UFJ8Chromo domain-containing protein. (299 aa)
A0A316UFL2WD40 repeat-like protein. (999 aa)
A0A316UFN2Rcd1-domain-containing protein. (389 aa)
A0A316UFS5DCP2-domain-containing protein. (784 aa)
A0A316UFU3HRDC domain-containing protein. (605 aa)
A0A316UG64Glucocorticoid receptor-like (DNA-binding domain). (50 aa)
A0A316UG73Uncharacterized protein. (711 aa)
A0A316UGA3RPOL4c domain-containing protein. (166 aa)
A0A316UGC2Opi1-domain-containing protein. (858 aa)
A0A316UH93Putative ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family. (494 aa)
A0A316UI36Uncharacterized protein. (1877 aa)
A0A316UII1Signal recognition particle, SRP9/SRP14 subunit. (149 aa)
A0A316UJ49Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1176 aa)
A0A316UJK1SAM domain-containing protein. (710 aa)
A0A316UKY9Inhibitor I9 domain-containing protein. (79 aa)
A0A316UL86UFD1-domain-containing protein. (445 aa)
A0A316ULG5zf-LYAR domain-containing protein. (315 aa)
A0A316UDI1DNA_MISMATCH_REPAIR_2 domain-containing protein. (1743 aa)
A0A316UC46Chromo domain-containing protein. (965 aa)
A0A316UC21Uncharacterized protein. (95 aa)
A0A316UBW4ARM repeat-containing protein. (1113 aa)
A0A316UBU7mRNA_decap_C domain-containing protein. (465 aa)
A0A316UBT9RNase_PH domain-containing protein. (384 aa)
A0A316UBI0DUF1168-domain-containing protein. (205 aa)
A0A316UBH4Kinase-like protein; Belongs to the protein kinase superfamily. (421 aa)
A0A316UBD2ESCRT-II complex, vps25 subunit. (210 aa)
A0A316UB94Pumilio1 in complex with Cyclinb reverse Rna. (359 aa)
A0A316UB80Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (602 aa)
A0A316UB56TPR-like protein. (1183 aa)
A0A316UB21Camp-binding domain-like protein. (775 aa)
A0A316UB04Uncharacterized protein. (411 aa)
A0A316UAZ0Rad60-SLD_2 domain-containing protein. (258 aa)
A0A316UAX8BRCT domain-containing protein. (899 aa)
A0A316U3R5Putative MRPL23-mitochondrial ribosomal protein, large subunit. (154 aa)
A0A316U468Plus3 domain-containing protein. (560 aa)
A0A316U4D1Amine oxidase. (577 aa)
A0A316U4L0DUF1752 domain-containing protein. (1181 aa)
A0A316U4S4HECT domain-containing protein. (1847 aa)
A0A316U527Uncharacterized protein. (2006 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1260 aa)
A0A316U5A0Histone-fold-containing protein. (92 aa)
A0A316U5C6RNase_PH domain-containing protein. (437 aa)
A0A316U5G8Putative CPC2 protein. (312 aa)
A0A316U5K9PHD-type domain-containing protein. (1121 aa)
A0A316U5N7Myb-like domain-containing protein. (654 aa)
A0A316TWM8JmjC-domain-containing protein. (1044 aa)
A0A316TX56R3H domain-containing protein. (1208 aa)
A0A316TYH3HDAC_interact domain-containing protein. (1600 aa)
A0A316TYK3Scavenger mRNA decapping enzyme. (390 aa)
A0A316TYW7Fork-head domain-containing protein. (199 aa)
A0A316TZ67Uncharacterized protein. (246 aa)
A0A316TZK0GRIM-19. (125 aa)
A0A316UAP1Uncharacterized protein. (1272 aa)
A0A316TZK2WD40 repeat-like protein. (883 aa)
A0A316U021YTH-domain-containing protein. (184 aa)
A0A316U091mRNA stability protein; Plays an essential role in initiation of the G0 program by preventing the degradation of specific nutrient-regulated mRNAs via the 5'-3' mRNA decay pathway. (186 aa)
A0A316U0F6GATA-type domain-containing protein. (50 aa)
A0A316U0G9Tr-type G domain-containing protein. (801 aa)
A0A316U0P1Orm1 type endoplasmic reticulum protein. (226 aa)
A0A316U0R3UV excision repair protein Rad23. (399 aa)
A0A316U0X1SAP domain-containing protein. (543 aa)
A0A316U170VPS37 C-terminal domain-containing protein. (204 aa)
A0A316U1K6Uncharacterized protein. (74 aa)
A0A316U2V2TIMELESS domain-containing protein. (1329 aa)
A0A316U356Arginase/deacetylase. (635 aa)
A0A316U3R0Fe2OG dioxygenase domain-containing protein. (497 aa)
A0A316U3R3Winged helix DNA-binding domain-containing protein. (290 aa)
A0A316UAL6Uncharacterized protein. (670 aa)
A0A316UAE7Uncharacterized protein. (437 aa)
A0A316UAC6Asparaginase-domain-containing protein. (714 aa)
A0A316UA09WD40 repeat-like protein. (844 aa)
A0A316U9V2TPR-like protein. (611 aa)
A0A316U9K7Chromo domain-containing protein. (390 aa)
A0A316U9G8Peptidyl-tRNA hydrolase II. (171 aa)
A0A316U977Uncharacterized protein. (240 aa)
A0A316U5R2ARM repeat-containing protein. (341 aa)
A0A316U658Uncharacterized protein. (252 aa)
A0A316U6B6PHD-type domain-containing protein. (644 aa)
A0A316U6U8W2 domain-containing protein. (425 aa)
A0A316U6X8Uncharacterized protein. (502 aa)
A0A316U73360S ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (200 aa)
A0A316U772Structural maintenance of chromosomes protein. (1222 aa)
A0A316U7A7Not1-domain-containing protein. (2057 aa)
A0A316U7B2Ribonuclease CAF1. (279 aa)
A0A316U7H8Serine/threonine-protein phosphatase. (332 aa)
A0A316U7I3Ubiquitin carboxyl-terminal hydrolase. (575 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (547 aa)
A0A316U7K9RNase_PH domain-containing protein. (348 aa)
A0A316U7M7H15 domain-containing protein. (158 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (119 aa)
A0A316U8A3UBX domain-containing protein. (264 aa)
A0A316U8C6Uncharacterized protein. (724 aa)
A0A316U8J0NYN domain-containing protein. (1058 aa)
A0A316U8J7SIR2-domain-containing protein. (526 aa)
A0A316U8N8Histone H2A; Belongs to the histone H2A family. (129 aa)
A0A316U8W5Uncharacterized protein. (522 aa)
A0A316U8X8KH_dom_type_1 domain-containing protein. (288 aa)
A0A316U8Y3PTH2-domain-containing protein. (158 aa)
Your Current Organism:
Pseudomicrostroma glucosiphilum
NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718
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