(14 nodes) Carboxy-terminal domain protein kinase complex network (Pseudomicrostroma glucosiphilum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A316UF99	SGNH hydrolase. (240 aa)
	A0A316TY24	Uncharacterized protein. (254 aa)
	A0A316TZR9	Uncharacterized protein. (65 aa)
	A0A316U2H0	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily. (433 aa)
	A0A316U3S4	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (483 aa)
	A0A316U577	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (530 aa)
	A0A316U5A9	Cyclin N-terminal domain-containing protein. (668 aa)
	A0A316U853	CDK-activating kinase assembly factor. (480 aa)
	A0A316U9M3	Transcription factor Tfb4. (385 aa)
	A0A316UBJ8	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily. (430 aa)
	A0A316UC80	CID domain-containing protein. (500 aa)
	A0A316UCU3	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily. (333 aa)
	A0A316UE08	Cyclin-like protein. (288 aa)
	A0A316UEV6	Uncharacterized protein. (695 aa)

Your Current Organism:

Pseudomicrostroma glucosiphilum

NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316TY24	A0A316TZR9	Uncharacterized protein.	Uncharacterized protein.	0.717
A0A316TY24	A0A316U2H0	Uncharacterized protein.	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	0.698
A0A316TY24	A0A316U3S4	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.982
A0A316TY24	A0A316U577	Uncharacterized protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.980
A0A316TY24	A0A316U5A9	Uncharacterized protein.	Cyclin N-terminal domain-containing protein.	0.692
A0A316TY24	A0A316U853	Uncharacterized protein.	CDK-activating kinase assembly factor.	0.998
A0A316TY24	A0A316U9M3	Uncharacterized protein.	Transcription factor Tfb4.	0.996
A0A316TY24	A0A316UBJ8	Uncharacterized protein.	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	0.997
A0A316TY24	A0A316UCU3	Uncharacterized protein.	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	0.698
A0A316TY24	A0A316UE08	Uncharacterized protein.	Cyclin-like protein.	0.818
A0A316TY24	A0A316UEV6	Uncharacterized protein.	Uncharacterized protein.	0.985
A0A316TZR9	A0A316TY24	Uncharacterized protein.	Uncharacterized protein.	0.717
A0A316TZR9	A0A316U3S4	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.997
A0A316TZR9	A0A316U577	Uncharacterized protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.976
A0A316TZR9	A0A316U853	Uncharacterized protein.	CDK-activating kinase assembly factor.	0.952
A0A316TZR9	A0A316U9M3	Uncharacterized protein.	Transcription factor Tfb4.	0.987
A0A316TZR9	A0A316UBJ8	Uncharacterized protein.	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	0.797
A0A316TZR9	A0A316UEV6	Uncharacterized protein.	Uncharacterized protein.	0.968
A0A316U2H0	A0A316TY24	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.698
A0A316U2H0	A0A316U5A9	Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.	Cyclin N-terminal domain-containing protein.	0.980