9 items (Pseudomicrostroma glucosiphilum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A316TWM8	JmjC-domain-containing protein. (1044 aa)
	A0A316UFW6	Uncharacterized protein. (2626 aa)
	A0A316UE24	JmjC domain-containing protein. (624 aa)
	A0A316UCX2	Clavaminate synthase-like protein. (299 aa)
	A0A316UCA1	JmjC domain-containing protein. (1013 aa)
	A0A316U6W1	Clavaminate synthase-like protein. (559 aa)
	A0A316U687	Clavaminate synthase-like protein. (415 aa)
	A0A316U4F4	Clavaminate synthase-like protein. (309 aa)
	A0A316U2E4	Clavaminate synthase-like protein. (681 aa)

Your Current Organism:

Pseudomicrostroma glucosiphilum

NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316TWM8	A0A316U2E4	JmjC-domain-containing protein.	Clavaminate synthase-like protein.	0.426
A0A316TWM8	A0A316U687	JmjC-domain-containing protein.	Clavaminate synthase-like protein.	0.512
A0A316TWM8	A0A316UE24	JmjC-domain-containing protein.	JmjC domain-containing protein.	0.535
A0A316TWM8	A0A316UFW6	JmjC-domain-containing protein.	Uncharacterized protein.	0.847
A0A316U2E4	A0A316TWM8	Clavaminate synthase-like protein.	JmjC-domain-containing protein.	0.426
A0A316U4F4	A0A316UCA1	Clavaminate synthase-like protein.	JmjC domain-containing protein.	0.528
A0A316U687	A0A316TWM8	Clavaminate synthase-like protein.	JmjC-domain-containing protein.	0.512
A0A316U687	A0A316UCA1	Clavaminate synthase-like protein.	JmjC domain-containing protein.	0.511
A0A316UCA1	A0A316U4F4	JmjC domain-containing protein.	Clavaminate synthase-like protein.	0.528
A0A316UCA1	A0A316U687	JmjC domain-containing protein.	Clavaminate synthase-like protein.	0.511
A0A316UE24	A0A316TWM8	JmjC domain-containing protein.	JmjC-domain-containing protein.	0.535
A0A316UFW6	A0A316TWM8	Uncharacterized protein.	JmjC-domain-containing protein.	0.847