22 items (Pseudomicrostroma glucosiphilum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A316U169	TFIID-18kDa-domain-containing protein. (549 aa)
	A0A316U585	Histone H2A; Belongs to the histone H2A family. (150 aa)
	A0A316U5A0	Histone-fold-containing protein. (92 aa)
	A0A316U5I8	TAF domain-containing protein. (535 aa)
	A0A316U6E4	Uncharacterized protein. (640 aa)
	A0A316U6G5	Bromo domain-containing protein. (916 aa)
	A0A316U6I9	Histone H2B; Belongs to the histone H2B family. (144 aa)
	A0A316U7G6	TAFII28-domain-containing protein. (314 aa)
	A0A316U7P2	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	A0A316U8N8	Histone H2A; Belongs to the histone H2A family. (129 aa)
	A0A316U8Q5	Uncharacterized protein. (280 aa)
	A0A316U9C8	Histone H3; Belongs to the histone H3 family. (136 aa)
	A0A316UBP5	TFIID_20kDa domain-containing protein. (687 aa)
	A0A316UD42	Histone-fold-containing protein. (148 aa)
	A0A316UDF5	TFIID-18kDa-domain-containing protein. (188 aa)
	A0A316UDF7	Histone H3; Belongs to the histone H3 family. (136 aa)
	A0A316UDZ8	Histone-fold-containing protein. (146 aa)
	A0A316UFG5	TFIID-31kDa-domain-containing protein. (218 aa)
	A0A316UGN6	Histone-fold-containing protein. (264 aa)
	A0A316U930	Histone-fold-containing protein. (155 aa)
	A0A316TXC8	CBFD_NFYB_HMF domain-containing protein. (381 aa)
	A0A316U0V8	Uncharacterized protein. (285 aa)

Your Current Organism:

Pseudomicrostroma glucosiphilum

NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316TXC8	A0A316UD42	CBFD_NFYB_HMF domain-containing protein.	Histone-fold-containing protein.	0.996
A0A316TXC8	A0A316UDZ8	CBFD_NFYB_HMF domain-containing protein.	Histone-fold-containing protein.	0.538
A0A316TXC8	A0A316UGN6	CBFD_NFYB_HMF domain-containing protein.	Histone-fold-containing protein.	0.991
A0A316U0V8	A0A316U585	Uncharacterized protein.	Histone H2A; Belongs to the histone H2A family.	0.519
A0A316U0V8	A0A316U5I8	Uncharacterized protein.	TAF domain-containing protein.	0.600
A0A316U0V8	A0A316U6E4	Uncharacterized protein.	Uncharacterized protein.	0.483
A0A316U0V8	A0A316U6I9	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.484
A0A316U0V8	A0A316U7G6	Uncharacterized protein.	TAFII28-domain-containing protein.	0.528
A0A316U0V8	A0A316U930	Uncharacterized protein.	Histone-fold-containing protein.	0.457
A0A316U0V8	A0A316U9C8	Uncharacterized protein.	Histone H3; Belongs to the histone H3 family.	0.457
A0A316U0V8	A0A316UDF7	Uncharacterized protein.	Histone H3; Belongs to the histone H3 family.	0.457
A0A316U0V8	A0A316UFG5	Uncharacterized protein.	TFIID-31kDa-domain-containing protein.	0.602
A0A316U169	A0A316U5I8	TFIID-18kDa-domain-containing protein.	TAF domain-containing protein.	0.992
A0A316U169	A0A316U6G5	TFIID-18kDa-domain-containing protein.	Bromo domain-containing protein.	0.993
A0A316U169	A0A316UBP5	TFIID-18kDa-domain-containing protein.	TFIID_20kDa domain-containing protein.	0.993
A0A316U169	A0A316UDZ8	TFIID-18kDa-domain-containing protein.	Histone-fold-containing protein.	0.423
A0A316U169	A0A316UFG5	TFIID-18kDa-domain-containing protein.	TFIID-31kDa-domain-containing protein.	0.992
A0A316U585	A0A316U0V8	Histone H2A; Belongs to the histone H2A family.	Uncharacterized protein.	0.519
A0A316U585	A0A316U5I8	Histone H2A; Belongs to the histone H2A family.	TAF domain-containing protein.	0.663
A0A316U585	A0A316U6E4	Histone H2A; Belongs to the histone H2A family.	Uncharacterized protein.	0.506