(20 nodes) AH/BAR domain superfamily network (Pseudomicrostroma glucosiphilum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A316TWR7	Uncharacterized protein. (1164 aa)
	A0A316TZD9	NUDE_C domain-containing protein. (643 aa)
	A0A316TZE7	PH domain-containing protein. (562 aa)
	A0A316U1V3	RhoGAP-domain-containing protein. (976 aa)
	A0A316U248	PH domain-containing protein. (578 aa)
	A0A316U3M2	NAD(P)-binding protein. (941 aa)
	A0A316U5I0	Uncharacterized protein. (248 aa)
	A0A316U6G6	Uncharacterized protein. (694 aa)
	A0A316U6J1	PX domain-containing protein. (674 aa)
	A0A316U6R1	Uncharacterized protein. (334 aa)
	A0A316U7X8	MHD domain-containing protein. (867 aa)
	A0A316U8A2	Uncharacterized protein. (488 aa)
	A0A316U926	Uncharacterized protein. (1409 aa)
	A0A316U987	RhoGAP-domain-containing protein. (979 aa)
	A0A316U9P7	DH domain-containing protein. (2027 aa)
	A0A316UBG6	BAR-domain-containing protein. (417 aa)
	A0A316UD48	Uncharacterized protein. (990 aa)
	A0A316UDZ2	Putative RVS161-protein. (263 aa)
	A0A316UG73	Uncharacterized protein. (711 aa)
	A0A316UGL6	PX domain-containing protein. (502 aa)

Your Current Organism:

Pseudomicrostroma glucosiphilum

NCBI taxonomy Id: 1684307
Other names: CBS 14053, MCA 4718, Microstromatales sp. MCA4718, NRRL 66310, P. glucosiphilum, Rhodotorula sp. MCA 4718

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316U1V3	A0A316U987	RhoGAP-domain-containing protein.	RhoGAP-domain-containing protein.	0.547
A0A316U6G6	A0A316UBG6	Uncharacterized protein.	BAR-domain-containing protein.	0.601
A0A316U6G6	A0A316UD48	Uncharacterized protein.	Uncharacterized protein.	0.807
A0A316U6G6	A0A316UDZ2	Uncharacterized protein.	Putative RVS161-protein.	0.585
A0A316U6J1	A0A316UGL6	PX domain-containing protein.	PX domain-containing protein.	0.976
A0A316U7X8	A0A316UD48	MHD domain-containing protein.	Uncharacterized protein.	0.571
A0A316U8A2	A0A316UGL6	Uncharacterized protein.	PX domain-containing protein.	0.621
A0A316U987	A0A316U1V3	RhoGAP-domain-containing protein.	RhoGAP-domain-containing protein.	0.547
A0A316U987	A0A316UD48	RhoGAP-domain-containing protein.	Uncharacterized protein.	0.723
A0A316U9P7	A0A316UBG6	DH domain-containing protein.	BAR-domain-containing protein.	0.457
A0A316U9P7	A0A316UDZ2	DH domain-containing protein.	Putative RVS161-protein.	0.965
A0A316UBG6	A0A316U6G6	BAR-domain-containing protein.	Uncharacterized protein.	0.601
A0A316UBG6	A0A316U9P7	BAR-domain-containing protein.	DH domain-containing protein.	0.457
A0A316UBG6	A0A316UD48	BAR-domain-containing protein.	Uncharacterized protein.	0.720
A0A316UBG6	A0A316UDZ2	BAR-domain-containing protein.	Putative RVS161-protein.	0.967
A0A316UBG6	A0A316UG73	BAR-domain-containing protein.	Uncharacterized protein.	0.562
A0A316UD48	A0A316U6G6	Uncharacterized protein.	Uncharacterized protein.	0.807
A0A316UD48	A0A316U7X8	Uncharacterized protein.	MHD domain-containing protein.	0.571
A0A316UD48	A0A316U987	Uncharacterized protein.	RhoGAP-domain-containing protein.	0.723
A0A316UD48	A0A316UBG6	Uncharacterized protein.	BAR-domain-containing protein.	0.720