(10 nodes) Phospholipid transport, and BolA protein network (Betaproteobacteria bacterium UKL132)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AMS33565.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa)
	AMS33566.1	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)
	AMS31697.1	Toluene ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	AMS31698.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
	AMS31699.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
	AMS33567.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)
	AMS33568.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (83 aa)
	AMS31700.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
	AMS31701.1	Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
	AMS31702.1	BolA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family. (84 aa)

Your Current Organism:

Betaproteobacteria bacterium UKL132

NCBI taxonomy Id: 1690485
Other names: B. bacterium UKL13-2, Betaproteobacteria bacterium UKL13-2

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMS31697.1	AMS31698.1	AEM42_03550	AEM42_03555	Toluene ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AMS31697.1	AMS31699.1	AEM42_03550	AEM42_03560	Toluene ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AMS31697.1	AMS33567.1	AEM42_03550	AEM42_03565	Toluene ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
AMS31697.1	AMS33568.1	AEM42_03550	AEM42_03570	Toluene ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
AMS31698.1	AMS31697.1	AEM42_03555	AEM42_03550	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Toluene ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AMS31698.1	AMS31699.1	AEM42_03555	AEM42_03560	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AMS31698.1	AMS31701.1	AEM42_03555	AEM42_03580	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.541
AMS31698.1	AMS33565.1	AEM42_03555	AEM42_03540	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.465
AMS31698.1	AMS33566.1	AEM42_03555	AEM42_03545	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.431
AMS31698.1	AMS33567.1	AEM42_03555	AEM42_03565	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
AMS31698.1	AMS33568.1	AEM42_03555	AEM42_03570	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.945
AMS31699.1	AMS31697.1	AEM42_03560	AEM42_03550	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Toluene ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AMS31699.1	AMS31698.1	AEM42_03560	AEM42_03555	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AMS31699.1	AMS33565.1	AEM42_03560	AEM42_03540	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.495
AMS31699.1	AMS33567.1	AEM42_03560	AEM42_03565	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AMS31699.1	AMS33568.1	AEM42_03560	AEM42_03570	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
AMS31700.1	AMS31701.1	AEM42_03575	AEM42_03580	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
AMS31700.1	AMS31702.1	AEM42_03575	AEM42_03585	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	BolA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.	0.787
AMS31700.1	AMS33567.1	AEM42_03575	AEM42_03565	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.464
AMS31700.1	AMS33568.1	AEM42_03575	AEM42_03570	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.594