(21 nodes) Binding-protein-dependent transport system inner membrane component network (Betaproteobacteria bacterium UKL132)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AMS32464.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
	AMS31202.1	Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
	AMS31339.1	Molybdate ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (230 aa)
	AMS31378.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
	AMS31379.1	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
	AMS31409.1	Phosphonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
	AMS33522.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
	AMS31551.1	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
	AMS31972.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
	AMS31973.1	Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
	AMS32011.1	Phosphonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
	AMS32012.1	Phosphonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
	AMS33725.1	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (548 aa)
	AMS32462.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
	AMS32527.1	Amino acid ABC transporter permease; With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
	AMS32528.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
	AMS33782.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
	AMS33848.1	Phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (334 aa)
	AMS32909.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
	AMS33220.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
	AMS33221.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)

Your Current Organism:

Betaproteobacteria bacterium UKL132

NCBI taxonomy Id: 1690485
Other names: B. bacterium UKL13-2, Betaproteobacteria bacterium UKL13-2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMS31378.1	AMS31379.1	AEM42_01325	AEM42_01330	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
AMS31378.1	AMS32462.1	AEM42_01325	AEM42_08870	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
AMS31378.1	AMS33220.1	AEM42_01325	AEM42_14075	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
AMS31379.1	AMS31378.1	AEM42_01330	AEM42_01325	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
AMS31379.1	AMS32464.1	AEM42_01330	AEM42_08880	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
AMS31379.1	AMS33221.1	AEM42_01330	AEM42_14080	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
AMS31551.1	AMS33522.1	AEM42_02475	AEM42_02470	Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AMS31972.1	AMS31973.1	AEM42_05325	AEM42_05330	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
AMS31972.1	AMS32527.1	AEM42_05325	AEM42_09335	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.635
AMS31972.1	AMS32528.1	AEM42_05325	AEM42_09340	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.639
AMS31973.1	AMS31972.1	AEM42_05330	AEM42_05325	Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
AMS31973.1	AMS32527.1	AEM42_05330	AEM42_09335	Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.794
AMS31973.1	AMS32528.1	AEM42_05330	AEM42_09340	Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.699
AMS32011.1	AMS32012.1	AEM42_05605	AEM42_05610	Phosphonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.818
AMS32012.1	AMS32011.1	AEM42_05610	AEM42_05605	Phosphonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.818
AMS32462.1	AMS31378.1	AEM42_08870	AEM42_01325	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
AMS32462.1	AMS32464.1	AEM42_08870	AEM42_08880	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
AMS32462.1	AMS33221.1	AEM42_08870	AEM42_14080	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
AMS32464.1	AMS31379.1	AEM42_08880	AEM42_01330	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
AMS32464.1	AMS32462.1	AEM42_08880	AEM42_08870	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977