STRINGSTRING
SHJ68322.1 SHJ68322.1 DppD DppD SHJ68371.1 SHJ68371.1 SHJ68393.1 SHJ68393.1 SHJ68414.1 SHJ68414.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SHJ68322.1Dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (339 aa)
DppDDipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (334 aa)
SHJ68371.1Dipeptide transport system permease protein. (305 aa)
SHJ68393.1Dipeptide transport system permease protein. (336 aa)
SHJ68414.1Dipeptide transport system substrate-binding protein. (542 aa)
Your Current Organism:
Paraburkholderia terricola
NCBI taxonomy Id: 169427
Other names: Burkholderia sp. LMG 20574, Burkholderia terricola, Burkholderia terricola Goris et al. 2003, CCM 7153, CCUG 44527, CIP 107794, DSM 17221, LMG 20594, LMG:20594, P. terricola, Paraburkholderia terricola (Goris et al. 2003) Sawana et al. 2015, strain R-8118
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