STRINGSTRING
SHK22948.1 SHK22948.1 SHK33273.1 SHK33273.1 SHK33476.1 SHK33476.1 SHK33505.1 SHK33505.1 SHK33534.1 SHK33534.1 SHK55719.1 SHK55719.1 SHK55741.1 SHK55741.1 SHK55764.1 SHK55764.1 SHK73076.1 SHK73076.1 SHK93183.1 SHK93183.1 SHK93202.1 SHK93202.1 SHK93226.1 SHK93226.1 SHK93245.1 SHK93245.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SHK22948.1Amino acid ABC transporter substrate-binding protein, PAAT family. (255 aa)
SHK33273.1Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family. (266 aa)
SHK33476.1Amino acid ABC transporter ATP-binding protein, PAAT family. (279 aa)
SHK33505.1Amino acid ABC transporter membrane protein 2, PAAT family. (237 aa)
SHK33534.1Amino acid ABC transporter membrane protein 1, PAAT family. (229 aa)
SHK55719.1Amino acid ABC transporter membrane protein 1, PAAT family. (229 aa)
SHK55741.1Amino acid ABC transporter membrane protein 2, PAAT family. (237 aa)
SHK55764.1Amino acid ABC transporter ATP-binding protein, PAAT family. (259 aa)
SHK73076.1Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family. (259 aa)
SHK93183.1Amino acid ABC transporter ATP-binding protein, PAAT family. (263 aa)
SHK93202.1Amino acid ABC transporter membrane protein 2, PAAT family. (251 aa)
SHK93226.1Amino acid ABC transporter membrane protein 1, PAAT family. (240 aa)
SHK93245.1Amino acid ABC transporter substrate-binding protein, PAAT family. (328 aa)
Your Current Organism:
Paraburkholderia terricola
NCBI taxonomy Id: 169427
Other names: Burkholderia sp. LMG 20574, Burkholderia terricola, Burkholderia terricola Goris et al. 2003, CCM 7153, CCUG 44527, CIP 107794, DSM 17221, LMG 20594, LMG:20594, P. terricola, Paraburkholderia terricola (Goris et al. 2003) Sawana et al. 2015, strain R-8118
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