(48 nodes) Mixed, incl. glycerol-3-phosphate transmembrane transporter activity, and Bacterial extracellular solute-binding protein network (Paraburkholderia terricola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SHJ43820.1	Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. (229 aa)
	SHJ43842.1	Sorbitol ABC transporter ATP-binding protein. (369 aa)
	SHJ43761.1	Sorbitol-binding protein /mannitol-binding protein. (440 aa)
	SHJ43789.1	Sorbitol ABC transporter membrane protein. (311 aa)
	SHJ43796.1	Sorbitol ABC transporter membrane protein. (291 aa)
	SHJ55358.1	Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (412 aa)
	SHJ55384.1	Carbohydrate ABC transporter membrane protein 1, CUT1 family. (313 aa)
	SHJ55405.1	Carbohydrate ABC transporter membrane protein 2, CUT1 family. (300 aa)
	SHJ55439.1	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (389 aa)
	SHJ56566.1	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (363 aa)
	SHJ56591.1	Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (446 aa)
	SHJ56615.1	Carbohydrate ABC transporter membrane protein 1, CUT1 family. (292 aa)
	SHJ56637.1	Carbohydrate ABC transporter membrane protein 2, CUT1 family. (274 aa)
	SHJ56905.1	Multiple sugar transport system substrate-binding protein. (493 aa)
	SHJ56921.1	Multiple sugar transport system permease protein. (384 aa)
	SHJ56940.1	Carbohydrate ABC transporter membrane protein 2, CUT1 family. (343 aa)
	SHJ56969.1	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (367 aa)
	SHJ90760.1	Carbohydrate ABC transporter membrane protein 2, CUT1 family. (283 aa)
	SHJ90786.1	Carbohydrate ABC transporter membrane protein 1, CUT1 family. (301 aa)
	SHJ90795.1	Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (417 aa)
	SHJ90821.1	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (379 aa)
	SHJ96053.1	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (360 aa)
	SHJ96089.1	Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (410 aa)
	SHJ96113.1	Carbohydrate ABC transporter membrane protein 1, CUT1 family. (296 aa)
	SHJ96126.1	Carbohydrate ABC transporter membrane protein 2, CUT1 family. (283 aa)
	SHK04703.1	Transcriptional regulator, DeoR family. (259 aa)
	SHK46222.1	Carbohydrate ABC transporter membrane protein 2, CUT1 family. (294 aa)
	SHK46237.1	Carbohydrate ABC transporter membrane protein 1, CUT1 family. (312 aa)
	SHK46258.1	Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (450 aa)
	SHK46284.1	Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (374 aa)
	SHK56798.1	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (371 aa)
	SHK56817.1	Carbohydrate ABC transporter membrane protein 2, CUT1 family. (285 aa)
	SHK56840.1	Carbohydrate ABC transporter membrane protein 1, CUT1 family. (312 aa)
	SHK56855.1	Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (415 aa)
	SHK58275.1	Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (580 aa)
	SHK58290.1	Predicted small integral membrane protein. (93 aa)
	SHK58313.1	Carbohydrate ABC transporter membrane protein 2, CUT1 family. (270 aa)
	SHK58330.1	Carbohydrate ABC transporter membrane protein 1, CUT1 family. (304 aa)
	SHK58350.1	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (374 aa)
	SHK58369.1	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (364 aa)
	ugpC	Glycerol 3-phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (362 aa)
	ugpE	Glycerol 3-phosphate ABC transporter membrane protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (281 aa)
	SHK63929.1	Glycerol 3-phosphate ABC transporter membrane protein /carbohydrate ABC transporter membrane protein 1, CUT1 family. (294 aa)
	SHK63945.1	Glycerol 3-phosphate-binding protein. (441 aa)
	SHK98402.1	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (384 aa)
	SHK98443.1	Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (417 aa)
	SHK98461.1	Carbohydrate ABC transporter membrane protein 1, CUT1 family. (325 aa)
	SHK98481.1	Carbohydrate ABC transporter membrane protein 2, CUT1 family. (283 aa)

Your Current Organism:

Paraburkholderia terricola

NCBI taxonomy Id: 169427
Other names: Burkholderia sp. LMG 20574, Burkholderia terricola, Burkholderia terricola Goris et al. 2003, CCM 7153, CCUG 44527, CIP 107794, DSM 17221, LMG 20594, LMG:20594, P. terricola, Paraburkholderia terricola (Goris et al. 2003) Sawana et al. 2015, strain R-8118

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SHJ43761.1	SHJ43789.1	SAMN05192548_10027	SAMN05192548_10028	Sorbitol-binding protein /mannitol-binding protein.	Sorbitol ABC transporter membrane protein.	0.991
SHJ43761.1	SHJ43796.1	SAMN05192548_10027	SAMN05192548_10029	Sorbitol-binding protein /mannitol-binding protein.	Sorbitol ABC transporter membrane protein.	0.984
SHJ43761.1	SHJ43820.1	SAMN05192548_10027	SAMN05192548_100210	Sorbitol-binding protein /mannitol-binding protein.	Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.	0.534
SHJ43761.1	SHJ43842.1	SAMN05192548_10027	SAMN05192548_100211	Sorbitol-binding protein /mannitol-binding protein.	Sorbitol ABC transporter ATP-binding protein.	0.934
SHJ43761.1	SHJ55384.1	SAMN05192548_10027	SAMN05192548_1003117	Sorbitol-binding protein /mannitol-binding protein.	Carbohydrate ABC transporter membrane protein 1, CUT1 family.	0.517
SHJ43761.1	SHJ55405.1	SAMN05192548_10027	SAMN05192548_1003118	Sorbitol-binding protein /mannitol-binding protein.	Carbohydrate ABC transporter membrane protein 2, CUT1 family.	0.543
SHJ43761.1	SHJ55439.1	SAMN05192548_10027	SAMN05192548_1003119	Sorbitol-binding protein /mannitol-binding protein.	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.	0.883
SHJ43761.1	SHJ56566.1	SAMN05192548_10027	SAMN05192548_1003170	Sorbitol-binding protein /mannitol-binding protein.	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.	0.883
SHJ43761.1	SHJ56615.1	SAMN05192548_10027	SAMN05192548_1003172	Sorbitol-binding protein /mannitol-binding protein.	Carbohydrate ABC transporter membrane protein 1, CUT1 family.	0.494
SHJ43761.1	SHJ56637.1	SAMN05192548_10027	SAMN05192548_1003173	Sorbitol-binding protein /mannitol-binding protein.	Carbohydrate ABC transporter membrane protein 2, CUT1 family.	0.548
SHJ43761.1	SHJ56921.1	SAMN05192548_10027	SAMN05192548_1003186	Sorbitol-binding protein /mannitol-binding protein.	Multiple sugar transport system permease protein.	0.510
SHJ43761.1	SHJ56940.1	SAMN05192548_10027	SAMN05192548_1003187	Sorbitol-binding protein /mannitol-binding protein.	Carbohydrate ABC transporter membrane protein 2, CUT1 family.	0.654
SHJ43761.1	SHJ56969.1	SAMN05192548_10027	SAMN05192548_1003188	Sorbitol-binding protein /mannitol-binding protein.	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.	0.883
SHJ43761.1	SHJ90760.1	SAMN05192548_10027	SAMN05192548_100973	Sorbitol-binding protein /mannitol-binding protein.	Carbohydrate ABC transporter membrane protein 2, CUT1 family.	0.532
SHJ43761.1	SHJ90786.1	SAMN05192548_10027	SAMN05192548_100974	Sorbitol-binding protein /mannitol-binding protein.	Carbohydrate ABC transporter membrane protein 1, CUT1 family.	0.513
SHJ43761.1	SHJ90821.1	SAMN05192548_10027	SAMN05192548_100976	Sorbitol-binding protein /mannitol-binding protein.	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.	0.899
SHJ43761.1	SHJ96053.1	SAMN05192548_10027	SAMN05192548_1010116	Sorbitol-binding protein /mannitol-binding protein.	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.	0.883
SHJ43761.1	SHJ96113.1	SAMN05192548_10027	SAMN05192548_1010119	Sorbitol-binding protein /mannitol-binding protein.	Carbohydrate ABC transporter membrane protein 1, CUT1 family.	0.498
SHJ43761.1	SHJ96126.1	SAMN05192548_10027	SAMN05192548_1010120	Sorbitol-binding protein /mannitol-binding protein.	Carbohydrate ABC transporter membrane protein 2, CUT1 family.	0.523
SHJ43761.1	SHK46222.1	SAMN05192548_10027	SAMN05192548_102343	Sorbitol-binding protein /mannitol-binding protein.	Carbohydrate ABC transporter membrane protein 2, CUT1 family.	0.586

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