STRINGSTRING
SHJ43796.1 SHJ43796.1 SHJ55405.1 SHJ55405.1 SHJ65100.1 SHJ65100.1 SHJ90760.1 SHJ90760.1 SHK36954.1 SHK36954.1 SHK98481.1 SHK98481.1 potA-5 potA-5 SHK56817.1 SHK56817.1 SHK67726.1 SHK67726.1 ugpE ugpE SHJ49447.1 SHJ49447.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SHJ43796.1Sorbitol ABC transporter membrane protein. (291 aa)
SHJ55405.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (300 aa)
SHJ65100.1Glycine betaine/proline transport system ATP-binding protein. (429 aa)
SHJ90760.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (283 aa)
SHK36954.1D-methionine transport system permease protein. (218 aa)
SHK98481.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (283 aa)
potA-5Putative spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (368 aa)
SHK56817.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (285 aa)
SHK67726.1Glycine betaine/proline transport system ATP-binding protein. (393 aa)
ugpEGlycerol 3-phosphate ABC transporter membrane protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (281 aa)
SHJ49447.1D-methionine transport system permease protein. (217 aa)
Your Current Organism:
Paraburkholderia terricola
NCBI taxonomy Id: 169427
Other names: Burkholderia sp. LMG 20574, Burkholderia terricola, Burkholderia terricola Goris et al. 2003, CCM 7153, CCUG 44527, CIP 107794, DSM 17221, LMG 20594, LMG:20594, P. terricola, Paraburkholderia terricola (Goris et al. 2003) Sawana et al. 2015, strain R-8118
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