(14 nodes) Solute-binding protein family 5 domain network (Paraburkholderia terricola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

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protein homology

Your Input:
	SHJ68414.1	Dipeptide transport system substrate-binding protein. (542 aa)
	SHJ45074.1	Peptide/nickel transport system substrate-binding protein. (560 aa)
	SHL12937.1	Oligopeptide transport system substrate-binding protein. (538 aa)
	SHK58068.1	Peptide/nickel transport system substrate-binding protein. (508 aa)
	SHK34848.1	Microcin C transport system substrate-binding protein. (639 aa)
	SHK12415.1	Dipeptide transport system substrate-binding protein. (528 aa)
	SHJ90445.1	Peptide/nickel transport system substrate-binding protein. (538 aa)
	SHJ76752.1	Peptide/nickel transport system substrate-binding protein. (549 aa)
	SHJ77971.1	Peptide/nickel transport system substrate-binding protein. (534 aa)
	SHJ77792.1	Peptide/nickel transport system substrate-binding protein. (523 aa)
	SHJ76955.1	Dipeptide transport system substrate-binding protein. (552 aa)
	SHJ46093.1	Glutathione transport system substrate-binding protein. (520 aa)
	SHJ68438.1	Dipeptide transport system substrate-binding protein. (545 aa)
	SHJ64621.1	Microcin C transport system substrate-binding protein. (654 aa)

Your Current Organism:

Paraburkholderia terricola

NCBI taxonomy Id: 169427
Other names: Burkholderia sp. LMG 20574, Burkholderia terricola, Burkholderia terricola Goris et al. 2003, CCM 7153, CCUG 44527, CIP 107794, DSM 17221, LMG 20594, LMG:20594, P. terricola, Paraburkholderia terricola (Goris et al. 2003) Sawana et al. 2015, strain R-8118

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SHJ45074.1	SHJ46093.1	SAMN05192548_100274	SAMN05192548_1002119	Peptide/nickel transport system substrate-binding protein.	Glutathione transport system substrate-binding protein.	0.524
SHJ45074.1	SHJ64621.1	SAMN05192548_100274	SAMN05192548_1004192	Peptide/nickel transport system substrate-binding protein.	Microcin C transport system substrate-binding protein.	0.423
SHJ45074.1	SHJ68414.1	SAMN05192548_100274	SAMN05192548_100521	Peptide/nickel transport system substrate-binding protein.	Dipeptide transport system substrate-binding protein.	0.467
SHJ45074.1	SHJ68438.1	SAMN05192548_100274	SAMN05192548_100522	Peptide/nickel transport system substrate-binding protein.	Dipeptide transport system substrate-binding protein.	0.475
SHJ45074.1	SHJ76752.1	SAMN05192548_100274	SAMN05192548_100695	Peptide/nickel transport system substrate-binding protein.	Peptide/nickel transport system substrate-binding protein.	0.479
SHJ45074.1	SHJ76955.1	SAMN05192548_100274	SAMN05192548_1006105	Peptide/nickel transport system substrate-binding protein.	Dipeptide transport system substrate-binding protein.	0.468
SHJ45074.1	SHJ77792.1	SAMN05192548_100274	SAMN05192548_1006151	Peptide/nickel transport system substrate-binding protein.	Peptide/nickel transport system substrate-binding protein.	0.514
SHJ45074.1	SHJ77971.1	SAMN05192548_100274	SAMN05192548_1006162	Peptide/nickel transport system substrate-binding protein.	Peptide/nickel transport system substrate-binding protein.	0.512
SHJ45074.1	SHJ90445.1	SAMN05192548_100274	SAMN05192548_100958	Peptide/nickel transport system substrate-binding protein.	Peptide/nickel transport system substrate-binding protein.	0.510
SHJ45074.1	SHK12415.1	SAMN05192548_100274	SAMN05192548_101411	Peptide/nickel transport system substrate-binding protein.	Dipeptide transport system substrate-binding protein.	0.489
SHJ45074.1	SHK34848.1	SAMN05192548_100274	SAMN05192548_101995	Peptide/nickel transport system substrate-binding protein.	Microcin C transport system substrate-binding protein.	0.423
SHJ45074.1	SHK58068.1	SAMN05192548_100274	SAMN05192548_102821	Peptide/nickel transport system substrate-binding protein.	Peptide/nickel transport system substrate-binding protein.	0.450
SHJ45074.1	SHL12937.1	SAMN05192548_100274	SAMN05192548_106320	Peptide/nickel transport system substrate-binding protein.	Oligopeptide transport system substrate-binding protein.	0.503
SHJ46093.1	SHJ45074.1	SAMN05192548_1002119	SAMN05192548_100274	Glutathione transport system substrate-binding protein.	Peptide/nickel transport system substrate-binding protein.	0.524
SHJ46093.1	SHJ64621.1	SAMN05192548_1002119	SAMN05192548_1004192	Glutathione transport system substrate-binding protein.	Microcin C transport system substrate-binding protein.	0.423
SHJ46093.1	SHJ68414.1	SAMN05192548_1002119	SAMN05192548_100521	Glutathione transport system substrate-binding protein.	Dipeptide transport system substrate-binding protein.	0.470
SHJ46093.1	SHJ68438.1	SAMN05192548_1002119	SAMN05192548_100522	Glutathione transport system substrate-binding protein.	Dipeptide transport system substrate-binding protein.	0.473
SHJ46093.1	SHJ76752.1	SAMN05192548_1002119	SAMN05192548_100695	Glutathione transport system substrate-binding protein.	Peptide/nickel transport system substrate-binding protein.	0.521
SHJ46093.1	SHJ76955.1	SAMN05192548_1002119	SAMN05192548_1006105	Glutathione transport system substrate-binding protein.	Dipeptide transport system substrate-binding protein.	0.473
SHJ46093.1	SHJ77792.1	SAMN05192548_1002119	SAMN05192548_1006151	Glutathione transport system substrate-binding protein.	Peptide/nickel transport system substrate-binding protein.	0.482

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