(36 nodes) Histidine kinase, and CdaR, GGDEF-like domain network (Paenibacillus sp. 32OW)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALS25992.1	Two-component system response regulator. (514 aa)
	ALS25993.1	HAMP domain-containing sensor protein. (577 aa)
	ALS26258.1	HAMP domain-containing sensor protein. (633 aa)
	ALS26263.1	Two-component system response regulator. (528 aa)
	ALS26269.1	Two-component system response regulator. (571 aa)
	ALS26270.1	Histidine kinase. (607 aa)
	ALS26381.1	Histidine kinase. (588 aa)
	ALS26382.1	Two-component system response regulator. (552 aa)
	ALS26779.1	Histidine kinase. (594 aa)
	ALS26780.1	Two-component system response regulator. (545 aa)
	ALS27068.1	AraC family transcriptional regulator. (535 aa)
	ALS27069.1	C50 carotenoid epsilon cyclase. (640 aa)
	ALS27861.1	Two-component system response regulator. (540 aa)
	ALS27862.1	HAMP domain-containing sensor protein. (609 aa)
	ALS27868.1	Histidine kinase. (599 aa)
	ALS27869.1	AraC family transcriptional regulator. (531 aa)
	ALS28067.1	Histidine kinase. (614 aa)
	ALS28068.1	Two-component system response regulator. (545 aa)
	ALS28480.1	Histidine kinase. (581 aa)
	ALS28481.1	Two-component system response regulator. (501 aa)
	ALS28568.1	Two-component system response regulator. (392 aa)
	ALS28569.1	Histidine kinase. (604 aa)
	ALS28636.1	Two-component system response regulator. (485 aa)
	ALS28637.1	HAMP domain-containing sensor protein. (621 aa)
	ALS29105.1	C50 carotenoid epsilon cyclase. (608 aa)
	ALS29106.1	Two-component system response regulator. (503 aa)
	ALS29543.1	Two-component system response regulator. (554 aa)
	ALS29544.1	HAMP domain-containing sensor protein. (592 aa)
	ALS29640.1	Two-component system response regulator. (437 aa)
	ALS29641.1	C50 carotenoid epsilon cyclase. (934 aa)
	ALS29863.1	C50 carotenoid epsilon cyclase. (569 aa)
	ALS29864.1	AraC family transcriptional regulator. (543 aa)
	ALS29903.1	Histidine kinase. (596 aa)
	ALS29904.1	AraC family transcriptional regulator. (524 aa)
	ALS29958.1	Two-component system response regulator. (482 aa)
	ALS29959.1	Histidine kinase. (582 aa)

Your Current Organism:

Paenibacillus sp. 32OW

NCBI taxonomy Id: 1695218
Other names: P. sp. 32O-W, Paenibacillus sp. 32O-W

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALS25992.1	ALS25993.1	IJ21_05600	IJ21_05610	Two-component system response regulator.	HAMP domain-containing sensor protein.	0.942
ALS25992.1	ALS26258.1	IJ21_05600	IJ21_08470	Two-component system response regulator.	HAMP domain-containing sensor protein.	0.824
ALS25992.1	ALS26270.1	IJ21_05600	IJ21_08590	Two-component system response regulator.	Histidine kinase.	0.829
ALS25992.1	ALS26381.1	IJ21_05600	IJ21_09720	Two-component system response regulator.	Histidine kinase.	0.791
ALS25992.1	ALS26779.1	IJ21_05600	IJ21_13750	Two-component system response regulator.	Histidine kinase.	0.849
ALS25992.1	ALS27069.1	IJ21_05600	IJ21_16670	Two-component system response regulator.	C50 carotenoid epsilon cyclase.	0.887
ALS25992.1	ALS27862.1	IJ21_05600	IJ21_24660	Two-component system response regulator.	HAMP domain-containing sensor protein.	0.829
ALS25992.1	ALS27868.1	IJ21_05600	IJ21_24720	Two-component system response regulator.	Histidine kinase.	0.813
ALS25992.1	ALS28067.1	IJ21_05600	IJ21_26710	Two-component system response regulator.	Histidine kinase.	0.825
ALS25992.1	ALS28480.1	IJ21_05600	IJ21_30840	Two-component system response regulator.	Histidine kinase.	0.819
ALS25992.1	ALS28569.1	IJ21_05600	IJ21_31750	Two-component system response regulator.	Histidine kinase.	0.827
ALS25992.1	ALS28637.1	IJ21_05600	IJ21_32460	Two-component system response regulator.	HAMP domain-containing sensor protein.	0.812
ALS25992.1	ALS29105.1	IJ21_05600	IJ21_37170	Two-component system response regulator.	C50 carotenoid epsilon cyclase.	0.807
ALS25992.1	ALS29544.1	IJ21_05600	IJ21_41600	Two-component system response regulator.	HAMP domain-containing sensor protein.	0.810
ALS25992.1	ALS29641.1	IJ21_05600	IJ21_42780	Two-component system response regulator.	C50 carotenoid epsilon cyclase.	0.846
ALS25992.1	ALS29863.1	IJ21_05600	IJ21_45000	Two-component system response regulator.	C50 carotenoid epsilon cyclase.	0.827
ALS25992.1	ALS29903.1	IJ21_05600	IJ21_45400	Two-component system response regulator.	Histidine kinase.	0.825
ALS25992.1	ALS29959.1	IJ21_05600	IJ21_45960	Two-component system response regulator.	Histidine kinase.	0.821
ALS25993.1	ALS25992.1	IJ21_05610	IJ21_05600	HAMP domain-containing sensor protein.	Two-component system response regulator.	0.942
ALS25993.1	ALS26263.1	IJ21_05610	IJ21_08520	HAMP domain-containing sensor protein.	Two-component system response regulator.	0.831