(15 nodes) PAS domain superfamily network (Paenibacillus sp. 32OW)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALS30131.1	PAS domain-containing two-component system sensor histidine kinase. (598 aa)
	ALS29948.1	PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase. (715 aa)
	ALS29782.1	Multi-sensor signal transduction histidine kinase. (549 aa)
	ALS29627.1	PAS domain-containing two-component system sensor histidine kinase/response regulator. (560 aa)
	ALS29393.1	Histidine kinase. (456 aa)
	ALS29227.1	Histidine kinase. (602 aa)
	ALS28316.1	Diguanylate cyclase. (749 aa)
	ALS28295.1	Multi-sensor hybrid histidine kinase. (946 aa)
	ALS27728.1	Histidine kinase. (485 aa)
	ALS26669.1	PAS domain-containing two-component system sensor histidine kinase. (604 aa)
	ALS26854.1	Diguanylate cyclase. (637 aa)
	ALS26534.1	Diguanylate cyclase. (558 aa)
	ALS25923.1	Histidine kinase. (759 aa)
	ALS25835.1	Histidine kinase. (610 aa)
	ALS25696.1	Signal transduction histidine kinase. (742 aa)

Your Current Organism:

Paenibacillus sp. 32OW

NCBI taxonomy Id: 1695218
Other names: P. sp. 32O-W, Paenibacillus sp. 32O-W

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALS25696.1	ALS25923.1	IJ21_02520	IJ21_04910	Signal transduction histidine kinase.	Histidine kinase.	0.917
ALS25696.1	ALS26669.1	IJ21_02520	IJ21_12650	Signal transduction histidine kinase.	PAS domain-containing two-component system sensor histidine kinase.	0.927
ALS25696.1	ALS28295.1	IJ21_02520	IJ21_28990	Signal transduction histidine kinase.	Multi-sensor hybrid histidine kinase.	0.659
ALS25696.1	ALS29393.1	IJ21_02520	IJ21_40070	Signal transduction histidine kinase.	Histidine kinase.	0.410
ALS25696.1	ALS29627.1	IJ21_02520	IJ21_42640	Signal transduction histidine kinase.	PAS domain-containing two-component system sensor histidine kinase/response regulator.	0.502
ALS25835.1	ALS28295.1	IJ21_04030	IJ21_28990	Histidine kinase.	Multi-sensor hybrid histidine kinase.	0.555
ALS25835.1	ALS29627.1	IJ21_04030	IJ21_42640	Histidine kinase.	PAS domain-containing two-component system sensor histidine kinase/response regulator.	0.436
ALS25923.1	ALS25696.1	IJ21_04910	IJ21_02520	Histidine kinase.	Signal transduction histidine kinase.	0.917
ALS25923.1	ALS26669.1	IJ21_04910	IJ21_12650	Histidine kinase.	PAS domain-containing two-component system sensor histidine kinase.	0.925
ALS25923.1	ALS28295.1	IJ21_04910	IJ21_28990	Histidine kinase.	Multi-sensor hybrid histidine kinase.	0.650
ALS25923.1	ALS29393.1	IJ21_04910	IJ21_40070	Histidine kinase.	Histidine kinase.	0.400
ALS25923.1	ALS29627.1	IJ21_04910	IJ21_42640	Histidine kinase.	PAS domain-containing two-component system sensor histidine kinase/response regulator.	0.493
ALS26534.1	ALS26854.1	IJ21_11250	IJ21_14500	Diguanylate cyclase.	Diguanylate cyclase.	0.712
ALS26534.1	ALS28295.1	IJ21_11250	IJ21_28990	Diguanylate cyclase.	Multi-sensor hybrid histidine kinase.	0.846
ALS26534.1	ALS28316.1	IJ21_11250	IJ21_29200	Diguanylate cyclase.	Diguanylate cyclase.	0.786
ALS26534.1	ALS29627.1	IJ21_11250	IJ21_42640	Diguanylate cyclase.	PAS domain-containing two-component system sensor histidine kinase/response regulator.	0.560
ALS26534.1	ALS29948.1	IJ21_11250	IJ21_45850	Diguanylate cyclase.	PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase.	0.785
ALS26669.1	ALS25696.1	IJ21_12650	IJ21_02520	PAS domain-containing two-component system sensor histidine kinase.	Signal transduction histidine kinase.	0.927
ALS26669.1	ALS25923.1	IJ21_12650	IJ21_04910	PAS domain-containing two-component system sensor histidine kinase.	Histidine kinase.	0.925
ALS26854.1	ALS26534.1	IJ21_14500	IJ21_11250	Diguanylate cyclase.	Diguanylate cyclase.	0.712