(8 nodes) Sigma-70, region 4 network (Paenibacillus sp. 32OW)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALS28361.1	Sigma-70 family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (240 aa)
	ALS26157.1	DNA-directed RNA polymerase sigma-70 factor. (216 aa)
	ALS26223.1	Subunit sigma-24 of RNA polymerase; Belongs to the sigma-70 factor family. ECF subfamily. (188 aa)
	ALS26810.1	DNA-directed RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily. (175 aa)
	ALS27260.1	Subunit sigma of DNA-directed RNA polymerase; Belongs to the sigma-70 factor family. ECF subfamily. (182 aa)
	ALS27573.1	RNA polymerase sigma factor SigD; Belongs to the sigma-70 factor family. (261 aa)
	ALS28929.1	RNA polymerase sigma factor SigZ; Belongs to the sigma-70 factor family. ECF subfamily. (186 aa)
	ALS29204.1	Subunit sigma-24 of RNA polymerase; Belongs to the sigma-70 factor family. (309 aa)

Your Current Organism:

Paenibacillus sp. 32OW

NCBI taxonomy Id: 1695218
Other names: P. sp. 32O-W, Paenibacillus sp. 32O-W

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALS26810.1	ALS28929.1	IJ21_14060	IJ21_35400	DNA-directed RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma factor SigZ; Belongs to the sigma-70 factor family. ECF subfamily.	0.706
ALS28361.1	ALS29204.1	IJ21_29650	IJ21_38180	Sigma-70 family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	Subunit sigma-24 of RNA polymerase; Belongs to the sigma-70 factor family.	0.656
ALS28929.1	ALS26810.1	IJ21_35400	IJ21_14060	RNA polymerase sigma factor SigZ; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.706
ALS29204.1	ALS28361.1	IJ21_38180	IJ21_29650	Subunit sigma-24 of RNA polymerase; Belongs to the sigma-70 factor family.	Sigma-70 family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.656