(5 nodes) Phenylacetate catabolic process network (Bordetella sp. H567)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOB32036.1	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
	AOB32037.1	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)
	AOB32038.1	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
	paaB	phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)
	AOB32040.1	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)

Your Current Organism:

Bordetella sp. H567

NCBI taxonomy Id: 1697043
Other names: B. sp. H567

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOB32036.1	AOB32037.1	AKI39_16965	AKI39_16970	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AOB32036.1	AOB32038.1	AKI39_16965	AKI39_16975	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AOB32036.1	AOB32040.1	AKI39_16965	AKI39_16985	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AOB32036.1	paaB	AKI39_16965	AKI39_16980	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AOB32037.1	AOB32036.1	AKI39_16970	AKI39_16965	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AOB32037.1	AOB32038.1	AKI39_16970	AKI39_16975	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AOB32037.1	AOB32040.1	AKI39_16970	AKI39_16985	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AOB32037.1	paaB	AKI39_16970	AKI39_16980	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AOB32038.1	AOB32036.1	AKI39_16975	AKI39_16965	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AOB32038.1	AOB32037.1	AKI39_16975	AKI39_16970	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AOB32038.1	AOB32040.1	AKI39_16975	AKI39_16985	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AOB32038.1	paaB	AKI39_16975	AKI39_16980	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AOB32040.1	AOB32036.1	AKI39_16985	AKI39_16965	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AOB32040.1	AOB32037.1	AKI39_16985	AKI39_16970	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AOB32040.1	AOB32038.1	AKI39_16985	AKI39_16975	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AOB32040.1	paaB	AKI39_16985	AKI39_16980	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
paaB	AOB32036.1	AKI39_16980	AKI39_16965	phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
paaB	AOB32037.1	AKI39_16980	AKI39_16970	phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
paaB	AOB32038.1	AKI39_16980	AKI39_16975	phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
paaB	AOB32040.1	AKI39_16980	AKI39_16985	phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.	phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999