STRINGSTRING
AIQ62008.1 AIQ62008.1 AIQ62834.1 AIQ62834.1 AIQ62837.1 AIQ62837.1 AIQ62838.1 AIQ62838.1 AIQ62839.1 AIQ62839.1 AIQ64360.1 AIQ64360.1 AIQ64552.1 AIQ64552.1 AIQ64553.1 AIQ64553.1 AIQ64554.1 AIQ64554.1 AIQ64555.1 AIQ64555.1 AIQ65232.1 AIQ65232.1 AIQ65233.1 AIQ65233.1 AIQ65234.1 AIQ65234.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIQ62008.1Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
AIQ62834.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
AIQ62837.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
AIQ62838.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
AIQ62839.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
AIQ64360.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
AIQ64552.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
AIQ64553.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
AIQ64554.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
AIQ64555.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
AIQ65232.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
AIQ65233.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
AIQ65234.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
Your Current Organism:
Paenibacillus stellifer
NCBI taxonomy Id: 169760
Other names: CCUG 45566, DSM 14472, P. stellifer, Paenibacillus stellifer Suominen et al. 2003, strain IS 1
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