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| | RecF | RecF protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. (370 aa) |
| | gyrB | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (646 aa) |
| | lmo0026 | Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family. (213 aa) |
| | lmo0027 | Lmo0027 protein; Similar to PTS system, beta-glucosides specific enzyme IIABC. (634 aa) |
| | rpsF | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (97 aa) |
| | rpsR | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (79 aa) |
| | dnaC | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (450 aa) |
| | lmo0067 | Lmo0067 protein; Similar to dinitrogenase reductase ADP-ribosylation system. (329 aa) |
| | lmo0075 | Lmo0075 protein; Similar to carboxyphosphonoenolpyruvate phosphonomutase. (257 aa) |
| | lmo0110 | Lmo0110 protein; Similar to lipase. (371 aa) |
| | lmo0133 | Lmo0133 protein; Similar to E. coli YjdI protein. (77 aa) |
| | lmo0134 | Lmo0134 protein; Similar to E. coli YjdJ protein. (92 aa) |
| | lmo0157 | Lmo0157 protein; Similar to ATP dependent helicase. (779 aa) |
| | lmo0187 | Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step; Belongs to the ribonuclease M5 family. (191 aa) |
| | lmo0190 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (293 aa) |
| | lmo0193 | Lmo0193 protein. (225 aa) |
| | ctc | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (207 aa) |
| | lmo0218 | Polyribonucleotide nucleotidyltransferase domain present. (142 aa) |
| | folK | FolK protein; Similar to 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase. (159 aa) |
| | lmo0227 | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (331 aa) |
| | lmo0231 | Protein-arginine kinase; Catalyzes the specific phosphorylation of arginine residues in proteins; Belongs to the ATP:guanido phosphotransferase family. (340 aa) |
| | lmo0240 | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. (136 aa) |
| | lmo0244 | Similar to ribosomal protein L33 type II; Belongs to the bacterial ribosomal protein bL33 family. (49 aa) |
| | rplK | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (141 aa) |
| | rplA | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (229 aa) |
| | rplJ | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (166 aa) |
| | rplL | Ribosomal protein L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (120 aa) |
| | inlG | Internalin G. (490 aa) |
| | inlH | Internalin H; Contributes to systemic listeriosis in mice by decreasing host IL-6 cytokine production and thus evasion of the host immune response. Does not contribute to invasion of the host intestinal tissue. (548 aa) |
| | inlE | Internalin E. (499 aa) |
| | lmo0265 | Lmo0265 protein; Similar to succinyldiaminopimelate desuccinylase. (379 aa) |
| | lmo0291 | Conserved hypothetical protein similar to B. subtilis YycJ protein. (276 aa) |
| | lmo0333 | Internalin I; A role in virulence could not be demonstrated. Belongs to the internalin family. (1778 aa) |
| | lmo0353 | Similar to unknown proteins. (137 aa) |
| | lmo0354 | Lmo0354 protein; Similar to fatty-acid--CoA ligase. (508 aa) |
| | lmo0385 | 5-dehydro-2-deoxygluconokinase; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP). (325 aa) |
| | lmo0401 | Lmo0401 protein; Highly similar to E. col YbgG protein, a putative sugar hydrolase. (875 aa) |
| | lmo0409 | Lmo0409 protein; Similar to internalin, peptidoglycan bound protein (LPxTG motif). (821 aa) |
| | lmo0429 | Lmo0429 protein; Similar to sugar hydrolase. (860 aa) |
| | inlA | Internalin A; Mediates the entry of L.monocytogenes into host intestinal epithelial cells; transformation with inlA alone allows L.innocua (a non-invasive species) to be taken up by host cells. Binds to human receptor cadherin-1 (E-cadherin, CDH1); the chicken homolog of cadherin-1 but not cadherin- 2 function as receptors. Mouse cadherin-1 is not a receptor, however mutating a single surface-exposed residue (Glu-172 to Pro in mouse) allows cadherin-1 to act as a receptor for InlA ; Belongs to the internalin family. (800 aa) |
| | lmo0458 | Lmo0458 protein; Similar to hydantoinase. (516 aa) |
| | lmo0470 | Methyltransferase; Weakly similar to site-specific DNA-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. (209 aa) |
| | lmo0476 | Lmo0476 protein; Similar to oxetanocin A resistance protein oxrB. (325 aa) |
| | rpmF | Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (56 aa) |
| | lmo0530 | Lmo0530 protein. (683 aa) |
| | lmo0538 | Lmo0538 protein; Similar to N-acyl-L-amino acid amidohydrolase. (393 aa) |
| | lmo0571 | Lmo0571 protein; Similar to methyltransferase. (98 aa) |
| | lmo0595 | Lmo0595 protein; Similar to O-acetylhomoserine sulfhydrylase. (425 aa) |
| | lmo0613 | Lmo0613 protein; Similar to oxidoreductase. (313 aa) |
| | lmo0617 | Lmo0617 protein. (164 aa) |
| | lmo0618 | Similar to protein kinase. (380 aa) |
| | lmo0728 | FAD synthetase; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme. Can also catalyze, with lower efficiency, the adenylation of the toxic riboflavin analogs 8-demethyl-8-aminoriboflavin mononucleotide (AFMN) and roseoflavin mononucleotide (RoFMN) to 8-demethyl-8-aminoriboflavin adenine dinucleotide (AFAD) and roseoflavin adenine dinucleotide (RoFAD), respectively ; Belongs to the RibF family. (246 aa) |
| | lmo0738 | Lmo0738 protein; Similar to phosphotransferase system (PTS) beta-glucoside-specific enzyme IIABC component. (617 aa) |
| | lmo0753 | Lmo0753 protein; Similar to transcription regulator Crp/Fnr family. (226 aa) |
| | lmo0763 | Similar to unknown proteins. (290 aa) |
| | lmo0765 | Lmo0765 protein. (432 aa) |
| | lmo0825 | Similar to 3-hydroxy-3-methylglutaryl-coenzyme a reductase; Belongs to the HMG-CoA reductase family. (426 aa) |
| | lmo0844 | Lmo0844 protein. (125 aa) |
| | lmo0866 | ATP-dependent RNA helicase CshA; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity (By similarity). Involved in cold tolerance, motility and alcohol tolerance; Belongs to the DEAD box helicase family. CshA subfamily. (520 aa) |
| | lmo0884 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (459 aa) |
| | rsbU | RsbU protein; Highly similar to serine phosphatase RsbU. (334 aa) |
| | rsbX | Indirect negative regulation of sigma B dependant gene expression (serine phosphatase). (199 aa) |
| | lmo0904 | Lmo0904 protein. (224 aa) |
| | lmo0930 | Conserved hypothetical protein, similar to B. subtilis YhfI protein. (243 aa) |
| | lmo0966 | Lmo0966 protein. (155 aa) |
| | lmo0976 | Lmo0976 protein; Similar to B. subtilis YjcF protein. (147 aa) |
| | lmo0996 | Methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (159 aa) |
| | lmo1000 | Lmo1000 protein; Similar to phytoene dehydrogenase. (490 aa) |
| | lmo1012 | N-acetyldiaminopimelate deacetylase; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate. (371 aa) |
| | lmo1018 | Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family. (231 aa) |
| | lmo1032 | Lmo1032 protein; Similar to transketolase. (274 aa) |
| | lmo1035 | Lmo1035 protein; Similar to phosphotransferase system (PTS) beta-glucoside-specific enzyme IIABC. (618 aa) |
| | pdhA | Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). (371 aa) |
| | PdhB | PdhB protein; Highly similar to pyruvate dehydrogenase (E1 beta subunit). (325 aa) |
| | lmo1067 | Lmo1067 protein; Similar to GTP-binding elongation factor. (612 aa) |
| | lmo1143 | Lmo1143 protein; Similar to Salmonella enterica PduT protein. (184 aa) |
| | lmo1144 | Lmo1144 protein; Similar to Salmonelle enterica PduU protein. (116 aa) |
| | lmo1145 | Lmo1145 protein; Similar to Salmonella enterica PduV protein; Belongs to the EutP/PduV family. (143 aa) |
| | lmo1151 | Lmo1151 protein; Similar to Salmonella typhimurium PduA protein. (95 aa) |
| | lmo1152 | Lmo1152 protein; Similar to Salmonella typhimurium PduB protein. (233 aa) |
| | lmo1153 | Lmo1153 protein; Highly similar to propanediol dehydratase, alpha subunit. (554 aa) |
| | lmo1154 | Lmo1154 protein; Similar to diol dehydrase (diol dehydratase) gamma subunit. (219 aa) |
| | lmo1155 | Lmo1155 protein; Similar to diol dehydrase (diol dehydratase) gamma subunit (pddC). (170 aa) |
| | lmo1157 | Lmo1157 protein; Similar to diol dehydratase-reactivating factor small chain. (115 aa) |
| | lmo1158 | Lmo1158 protein; Similar to Salmonella enterica PduK protein. (145 aa) |
| | lmo1159 | Lmo1159 protein; Similar to carboxysome structural protein. (91 aa) |
| | lmo1160 | Phosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. (211 aa) |
| | lmo1162 | Lmo1162 protein. (159 aa) |
| | lmo1163 | Lmo1163 protein; Similar to carbon dioxide concentrating mechanism protein. (87 aa) |
| | AckA2 | Acetate kinase 2; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (397 aa) |
| | eutA | EutA protein; Similar to ethanolamine utilization protein EutA (putative chaperonin). (473 aa) |
| | eutC | Similar to ethanolamine ammonia-lyase, light chain; Belongs to the EutC family. (293 aa) |
| | lmo1177 | Lmo1177 protein; Similar to putative carboxysome structural protein (eutL). (217 aa) |
| | lmo1178 | Lmo1178 protein; Similar to putative carboxysome structural protein. (173 aa) |
| | lmo1180 | Lmo1180 protein; Similar to putative carboxysome structural protein. (94 aa) |
| | lmo1181 | Lmo1181 protein; Similar to cobalamin adenosyl transferase. (251 aa) |
| | lmo1182 | Phosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. (213 aa) |
| | lmo1184 | Lmo1184 protein; Similar to carbon dioxide concentrating mechanism protein. (89 aa) |
| | lmo1185 | Lmo1185 protein; Similar to Salmonella enterica PduT protein. (181 aa) |
| | lmo1187 | Lmo1187 protein; Similar to ethanolamine utilization protein EutQ. (147 aa) |
| | lmo1209 | Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (188 aa) |
| | lmo1212 | Similar to unknown proteins. (176 aa) |
| | lmo1231 | Lmo1231 protein; Similar to DNA polymerase beta, to B. subtilis YshC protein. (570 aa) |
| | trxA | Thioredoxin; Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (By similarity). (103 aa) |
| | lmo1242 | Lmo1242 protein; Similar to B. subtilis YdeI protein. (197 aa) |
| | lmo1246 | ATP-dependent RNA helicase DbpA; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. (470 aa) |
| | lmo1255 | Lmo1255 protein; Similar to PTS system trehalose specific enzyme IIBC. (494 aa) |
| | lmo1272 | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (287 aa) |
| | topA | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (692 aa) |
| | parE | DNA topoisomerase 4 subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. (655 aa) |
| | lmo1289 | Similar to internalin proteins, putative peptidoglycan bound protein (LPXTG motif). (593 aa) |
| | lmo1311 | Lmo1311 protein. (401 aa) |
| | lmo1324 | Conserved hypothetical protein, similar to B. subtilis YlxQ protein. (99 aa) |
| | ribC | Bifunctional riboflavin kinase/FMN adenylyltransferase; Catalyzes the phosphorylation of riboflavin to FMN followed by the adenylation of FMN to FAD. Can also catalyze the phosphorylation of the toxic riboflavin analogs 8-demethyl-8- aminoriboflavin (AF) to 8-demethyl-8-aminoriboflavin mononucleotide (AFMN) and roseoflavin (RoF) to roseoflavin mononucleotide (RoFMN), and the adenylation of AFMN to 8-demethyl-8-aminoriboflavin adenine dinucleotide (AFAD) ; Belongs to the RibF family. (314 aa) |
| | rpsO | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. (89 aa) |
| | rpmG | Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (49 aa) |
| | lmo1337 | Lmo1337 protein; Similar to B. subtilis yqgP. (512 aa) |
| | lmo1363 | Lmo1363 protein; Similar to geranyltranstransferase; Belongs to the FPP/GGPP synthase family. (293 aa) |
| | recN | DNA repair and genetic recombination; May be involved in recombinational repair of damaged DNA. (563 aa) |
| | lmo1372 | Lmo1372 protein; Similar to branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit). (331 aa) |
| | lmo1373 | Lmo1373 protein; Similar to branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit). (327 aa) |
| | lmo1383 | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (358 aa) |
| | lmo1412 | Modulates DNA topology. (177 aa) |
| | lmo1415 | Lmo1415 protein; Similar to hydroxy-3-methylglutaryl coenzyme A synthase. (388 aa) |
| | lmo1449 | Probable endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate. (297 aa) |
| | lmo1450 | DEAD-box ATP-dependent RNA helicase CshB; DEAD-box RNA helicase involved in cold tolerance, motility, and tolerance to heat, alkali and oxidative stress. (435 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (626 aa) |
| | lmo1460 | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (255 aa) |
| | lmo1464 | Lmo1464 protein; Similar to diacylglycerol kinase. (131 aa) |
| | lmo1465 | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (161 aa) |
| | rpsU | 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (57 aa) |
| | lmo1477 | Lmo1477 protein; Similar to oxidoreductase. (342 aa) |
| | rpsT | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (84 aa) |
| | comEB | ComEB protein; Similar to B. subtilis ComEB protein. (186 aa) |
| | lmo1488 | Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (188 aa) |
| | lmo1491 | Similar to unknown proteins. (366 aa) |
| | udk | Similar to Uridine kinase. (209 aa) |
| | lmo1502 | Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. (138 aa) |
| | lmo1513 | Lmo1513 protein; Similar to iron-sulfur cofactor synthesis protein. (382 aa) |
| | lmo1514 | Lmo1514 protein. (425 aa) |
| | lmo1522 | D-aminoacyl-tRNA deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (150 aa) |
| | lmo1536 | Similar to prephenate dehydratase PheA. (282 aa) |
| | rpmA | Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (96 aa) |
| | rplU | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (102 aa) |
| | lmo1549 | UPF0758 protein lmo1549; Similar to DNA repair protein RadC; Belongs to the UPF0758 family. (224 aa) |
| | hemA | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (435 aa) |
| | dnaI | Primosome component (helicase loader) DnaI. (307 aa) |
| | dnaB | Chromosome replication initiation / membrane attachment protein DnaB. (458 aa) |
| | lmo1575 | Similar to unknown proteins. (311 aa) |
| | lmo1577 | UPF0173 metal-dependent hydrolase lmo1577; Similar to unknown proteins; Belongs to the UPF0173 family. (228 aa) |
| | ackA | Acetate kinase 1; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (397 aa) |
| | argB | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (250 aa) |
| | argC | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (343 aa) |
| | lmo1593 | Lmo1593 protein; Similar to iron-sulfur cofactor synthesis protein nifS. (379 aa) |
| | lmo1594 | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. (571 aa) |
| | rpsD | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (200 aa) |
| | lmo1609 | Lmo1609 protein; Similar to thioredoxin. (103 aa) |
| | lmo1643 | Lmo1643 protein. (140 aa) |
| | lmo1644 | Lmo1644 protein; Similar to SNF2-type helicase. (1072 aa) |
| | lmo1646 | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (374 aa) |
| | rpsB | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (249 aa) |
| | menF | MenF protein; Similar to menaquinone-specific isochorismate synthase. (462 aa) |
| | lmo1694 | Lmo1694 protein; Similar to CDP-abequose synthase. (300 aa) |
| | lmo1697 | Lmo1697 protein; Similar to putative transmembrane proteins; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (321 aa) |
| | lmo1705 | Lmo1705 protein; Similar to deoxyguanosine kinase/deoxyadenosine kinase(I) subunit. (214 aa) |
| | lmo1722 | Lmo1722 protein; Similar to ATP-dependent RNA helicases. (441 aa) |
| | lmo1734 | Lmo1734 protein; Similar to glutamate synthase (large subunit). (1530 aa) |
| | lmo1736 | Similar to unknown proteins. (172 aa) |
| | lmo1737 | Lmo1737 protein; Similar to glycerol dehydrogenase. (368 aa) |
| | lmo1741 | Lmo1741 protein; Similar to two-component sensor histidine kinase. (346 aa) |
| | purD | Phosphoribosylglycinamide synthetase. (420 aa) |
| | purF | Glutamine phosphoribosylpyrophosphate amidotransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (475 aa) |
| | rplT | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (119 aa) |
| | rpmI | Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (66 aa) |
| | rplS | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (114 aa) |
| | rpsP | Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (90 aa) |
| | smc | Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1186 aa) |
| | rpmB | Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (62 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (797 aa) |
| | lmo1877 | Formate--tetrahydrofolate ligase; Similar to formyl-tetrahydrofolate synthetase N-terminal part; Belongs to the formate--tetrahydrofolate ligase family. (426 aa) |
| | lmo1880 | Lmo1880 protein; Similar to similar to RNase HI. (133 aa) |
| | lmo1882 | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (89 aa) |
| | nth | Probable endonuclease III (DNA repair); DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (219 aa) |
| | dnaD | DnaD protein; Similar to chromosome replication initiation protein. (239 aa) |
| | dinG | 3'-5' exonuclease DinG; 3'-5' exonuclease. (928 aa) |
| | lmo1926 | Chorismate mutase AroH; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. (124 aa) |
| | hup | Hup protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (91 aa) |
| | lmo1938 | Lmo1938 protein; Similar to similar to ribosomal protein S1 like protein. (381 aa) |
| | recS | RecS protein; Similar to ATP-dependent DNA helicase. (467 aa) |
| | lmo1946 | Lmo1946 protein; Similar to similar to acyl-CoA hydrolase. (172 aa) |
| | lysA | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (436 aa) |
| | lmo1976 | Lmo1976 protein; Similar to oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (263 aa) |
| | lmo1977 | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (306 aa) |
| | leuA | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (512 aa) |
| | lmo2013 | Similar to unknown proteins. (434 aa) |
| | lmo2014 | Lmo2014 protein; Similar to putative sugar hydrolases. (885 aa) |
| | lmo2015 | Lmo2015 protein; Similar to alpha-mannosidase. (1036 aa) |
| | lmo2022 | Similar to a NifS-like protein required for NAD biosynthesis. (368 aa) |
| | nadC | NadC protein; Similar to nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. (281 aa) |
| | lmo2028 | Similar to unknown proteins. (258 aa) |
| | rpmF-2 | Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (57 aa) |
| | ctaA | Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily. (305 aa) |
| | lmo2084 | Lmo2084 protein. (297 aa) |
| | lmo2089 | Lmo2089 protein; Similar to lipases. (347 aa) |
| | lmo2094 | Lmo2094 protein; Similar to L-fuculose-phosphate aldolase. (216 aa) |
| | lmo2101 | Pyridoxal 5'-phosphate synthase subunit PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (295 aa) |
| | lmo2106 | Similar to unknown proteins. (284 aa) |
| | lmo2201 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (413 aa) |
| | hemH | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (309 aa) |
| | lmo2222 | Similar to unknown proteins. (411 aa) |
| | lmo2231 | Similar to unknown proteins; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (289 aa) |
| | lmo2242 | Lmo2242 protein; Similar to O6-methylguanine-DNA methyltransferase. (160 aa) |
| | lmo2260 | Similar to unknown proteins. (291 aa) |
| | lmo2266 | Similar to unknown proteins. (282 aa) |
| | lmo2317 | Similar to protein gp49 [Bacteriophage A118]. (324 aa) |
| | lmo2329 | Lmo2329 protein; Similar to a putative repressor protein [Bacteriophage A118]. (158 aa) |
| | lmo2334 | Competence transcription factor (C-terminal part); Similar to transcriptional regulator. (115 aa) |
| | lmo2369 | Lmo2369 protein; Similar to B. subtilis general stress protein 13 containing a ribosomal S1 protein domain. (117 aa) |
| | lmo2411 | Lmo2411 protein; Similar to conserved hypothetical proteins. (464 aa) |
| | lmo2414 | Lmo2414 protein; Similar to aminotransferase. (433 aa) |
| | lmo2415 | Lmo2415 protein; Similar to ABC transporter, ATP-binding protein. (261 aa) |
| | lmo2423 | Lmo2423 protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (291 aa) |
| | lmo2438 | Lmo2438 protein. (170 aa) |
| | lmo2479 | Lmo2479 protein. (491 aa) |
| | lmo2511 | Ribosome hibernation promoting factor; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (187 aa) |
| | rpmE | Ribosomal protein L31. (81 aa) |
| | lmo2565 | Lmo2565 protein. (440 aa) |
| | lmo2575 | Lmo2575 protein; Similar to cation transport protein (efflux). (303 aa) |
| | rpsI | Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (130 aa) |
| | rplM | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (145 aa) |
| | truA | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (248 aa) |
| | lmo2603 | Lmo2603 protein. (296 aa) |
| | rplQ | Ribosomal protein L17. (135 aa) |
| | rpsK | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (129 aa) |
| | rpsM | Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (121 aa) |
| | rpmJ | Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (37 aa) |
| | rplO | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (146 aa) |
| | rpmD | Ribosomal protein L30. (59 aa) |
| | rpsE | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. (167 aa) |
| | rplR | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (119 aa) |
| | rplF | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (178 aa) |
| | rpsH | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa) |
| | rpsN | Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. (61 aa) |
| | rplE | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa) |
| | rplX | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (103 aa) |
| | rplN | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rpsQ | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (87 aa) |
| | rpmC | Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (63 aa) |
| | rplP | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (144 aa) |
| | rpsC | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (218 aa) |
| | rplV | Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). (118 aa) |
| | rpsS | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa) |
| | rplB | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (277 aa) |
| | rplW | Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (94 aa) |
| | rplD | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (207 aa) |
| | rplC | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (209 aa) |
| | rpsJ | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa) |
| | rpsG | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsL | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. (137 aa) |
| | lmo2701 | Lmo2701 protein; Similar to B. subtilis YaaL protein. (81 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (198 aa) |
| | lmo2703 | Nucleoid-associated protein lmo2703; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (105 aa) |
| | lmo2719 | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (156 aa) |
| | lmo2720 | Lmo2720 protein; Similar to acetate-CoA ligase. (525 aa) |
| | lmo2729 | Similar to unknown proteins. (134 aa) |
| | lmo2734 | Lmo2734 protein; Weakly similar to sugar hydrolase. (882 aa) |
| | lmo2739 | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form. (229 aa) |
| | lmo2746 | Lmo2746 protein. (83 aa) |
| | topB | DNA topoisomerase 3; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (717 aa) |
| | lmo2757 | Lmo2757 protein; Similar to ATP-dependent DNA helicases. (590 aa) |
| | guaB | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (488 aa) |
| | lmo2772 | Lmo2772 protein; Similar to beta-glucoside-specific enzyme IIABC. (617 aa) |
| | lmo2779 | Ribosome-binding ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (366 aa) |
| | bvrC | BvrC protein. (327 aa) |
| | bvrB | Beta-glucoside-specific phosphotransferase enzyme II ABC component. (640 aa) |
| | parB | Partition protein ParB homolg; Belongs to the ParB family. (283 aa) |
| | lmo2794 | Nucleoid occlusion protein; Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage. Belongs to the ParB family. (284 aa) |
| | lmo2809 | Hypothetical secreted protein. (126 aa) |
| | lmo2817 | Lmo2817 protein; Similar to peptidases. (396 aa) |
| | lmo2819 | Lmo2819 protein; Similar to carboxypeptidase. (400 aa) |
| | serC | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (363 aa) |
| | lmo2829 | Similar to yeast protein Frm2p involved in fatty acid signaling. (199 aa) |
| | lmo2830 | Similar to thioredoxin; Belongs to the thioredoxin family. (106 aa) |
| | lmo2847 | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. (273 aa) |
| | rpmH | Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (44 aa) |
