Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| lmo1802 | sigH | gene:17594487 | gene:17592894 | UPF0122 protein lmo1802; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. | RNA polymerase sigma-30 factor (sigma-H); Belongs to the sigma-70 factor family. | 0.607 |
| rpoD | sigB | gene:17594111 | gene:17593546 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | RNA polymerase sigma-37 factor (sigma-B); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.502 |
| rpoD | sigH | gene:17594111 | gene:17592894 | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | RNA polymerase sigma-30 factor (sigma-H); Belongs to the sigma-70 factor family. | 0.565 |
| sigB | rpoD | gene:17593546 | gene:17594111 | RNA polymerase sigma-37 factor (sigma-B); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.502 |
| sigB | sigH | gene:17593546 | gene:17592894 | RNA polymerase sigma-37 factor (sigma-B); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase sigma-30 factor (sigma-H); Belongs to the sigma-70 factor family. | 0.484 |
| sigH | lmo1802 | gene:17592894 | gene:17594487 | RNA polymerase sigma-30 factor (sigma-H); Belongs to the sigma-70 factor family. | UPF0122 protein lmo1802; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. | 0.607 |
| sigH | rpoD | gene:17592894 | gene:17594111 | RNA polymerase sigma-30 factor (sigma-H); Belongs to the sigma-70 factor family. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.565 |
| sigH | sigB | gene:17592894 | gene:17593546 | RNA polymerase sigma-30 factor (sigma-H); Belongs to the sigma-70 factor family. | RNA polymerase sigma-37 factor (sigma-B); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.484 |