STRINGSTRING
AOA65_0280 AOA65_0280 lig_1 lig_1 lig_2 lig_2 AOA65_1253 AOA65_1253 AOA65_1433 AOA65_1433 lig_3 lig_3 AOA65_2284 AOA65_2284 pcn pcn
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOA65_0280Hypothetical protein. (234 aa)
lig_1DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. (594 aa)
lig_2DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. (551 aa)
AOA65_1253Single-stranded DNA-binding protein. (102 aa)
AOA65_1433Excinuclease ABC subunit C. (230 aa)
lig_3DNA ligase; Belongs to the ATP-dependent DNA ligase family. (598 aa)
AOA65_2284ATP-dependent DNA helicase. (646 aa)
pcnDNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. (251 aa)
Your Current Organism:
Bathyarchaeota archaeon BA1
NCBI taxonomy Id: 1700835
Other names: C. Bathyarchaeota archaeon BA1, Candidatus Bathyarchaeota archaeon BA1
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