(5 nodes) Mixed, incl. XdhC- CoxI, and [2Fe-2S]-binding network (Arthrobacter sp. ERGS101)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALE05844.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
	ALE05845.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
	ALE05846.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (803 aa)
	ALE05847.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (176 aa)
	ALE05848.1	XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)

Your Current Organism:

Arthrobacter sp. ERGS101

NCBI taxonomy Id: 1704044
Other names: A. sp. ERGS1:01, Arthrobacter sp. ERGS1:01

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALE05844.1	ALE05845.1	AL755_10800	AL755_10805	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
ALE05844.1	ALE05846.1	AL755_10800	AL755_10810	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
ALE05844.1	ALE05847.1	AL755_10800	AL755_10815	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.866
ALE05844.1	ALE05848.1	AL755_10800	AL755_10820	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.806
ALE05845.1	ALE05844.1	AL755_10805	AL755_10800	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
ALE05845.1	ALE05846.1	AL755_10805	AL755_10810	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
ALE05845.1	ALE05847.1	AL755_10805	AL755_10815	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
ALE05845.1	ALE05848.1	AL755_10805	AL755_10820	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.938
ALE05846.1	ALE05844.1	AL755_10810	AL755_10800	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
ALE05846.1	ALE05845.1	AL755_10810	AL755_10805	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
ALE05846.1	ALE05847.1	AL755_10810	AL755_10815	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
ALE05846.1	ALE05848.1	AL755_10810	AL755_10820	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
ALE05847.1	ALE05844.1	AL755_10815	AL755_10800	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.866
ALE05847.1	ALE05845.1	AL755_10815	AL755_10805	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
ALE05847.1	ALE05846.1	AL755_10815	AL755_10810	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
ALE05847.1	ALE05848.1	AL755_10815	AL755_10820	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
ALE05848.1	ALE05844.1	AL755_10820	AL755_10800	XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.806
ALE05848.1	ALE05845.1	AL755_10820	AL755_10805	XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.938
ALE05848.1	ALE05846.1	AL755_10820	AL755_10810	XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
ALE05848.1	ALE05847.1	AL755_10820	AL755_10815	XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914