Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALE05081.1 | deoC | AL755_05585 | AL755_06290 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.581 |
| ALE05788.1 | ALE07550.1 | AL755_10435 | AL755_04425 | Allantoicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.923 |
| ALE05800.1 | ALE05801.1 | AL755_10505 | AL755_10510 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.877 |
| ALE05800.1 | ALE05845.1 | AL755_10505 | AL755_10805 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.869 |
| ALE05801.1 | ALE05800.1 | AL755_10510 | AL755_10505 | FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.877 |
| ALE05801.1 | ALE05848.1 | AL755_10510 | AL755_10820 | FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.610 |
| ALE05845.1 | ALE05800.1 | AL755_10805 | AL755_10505 | Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.869 |
| ALE05845.1 | ALE05848.1 | AL755_10805 | AL755_10820 | Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.938 |
| ALE05848.1 | ALE05801.1 | AL755_10820 | AL755_10510 | XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.610 |
| ALE05848.1 | ALE05845.1 | AL755_10820 | AL755_10805 | XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.938 |
| ALE06007.1 | ALE06008.1 | AL755_11855 | AL755_11860 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.672 |
| ALE06008.1 | ALE06007.1 | AL755_11860 | AL755_11855 | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.672 |
| ALE06112.1 | ALE06777.1 | AL755_12595 | AL755_17135 | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 0.415 |
| ALE06112.1 | ALE07307.1 | AL755_12595 | AL755_20495 | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.415 |
| ALE06533.1 | dut | AL755_15520 | AL755_08805 | Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.428 |
| ALE06533.1 | rph | AL755_15520 | AL755_15525 | Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.992 |
| ALE06777.1 | ALE06112.1 | AL755_17135 | AL755_12595 | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.415 |
| ALE06777.1 | pnp | AL755_17135 | AL755_07325 | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.878 |
| ALE06777.1 | rnhB | AL755_17135 | AL755_14560 | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.504 |
| ALE06777.1 | rph | AL755_17135 | AL755_15525 | DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.623 |
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