(10 nodes) Beta-grasp domain superfamily network (Arthrobacter sp. ERGS101)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALE06742.1	Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology. (79 aa)
	ALE07174.1	Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)
	ALE08066.1	Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology. (93 aa)
	ychF	GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (361 aa)
	ALE06325.1	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
	ALE07792.1	GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (753 aa)
	ALE05847.1	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (176 aa)
	ALE05802.1	Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (928 aa)
	ALE05325.1	Molybdenum cofactor biosynthesis protein MoaD; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)
	ALE05071.1	Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (266 aa)

Your Current Organism:

Arthrobacter sp. ERGS101

NCBI taxonomy Id: 1704044
Other names: A. sp. ERGS1:01, Arthrobacter sp. ERGS1:01

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALE05325.1	ALE08066.1	AL755_07335	AL755_21425	Molybdenum cofactor biosynthesis protein MoaD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
ALE05802.1	ALE05847.1	AL755_10515	AL755_10815	Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.803
ALE05847.1	ALE05802.1	AL755_10815	AL755_10515	Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.803
ALE08066.1	ALE05325.1	AL755_21425	AL755_07335	Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molybdenum cofactor biosynthesis protein MoaD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908