STRINGSTRING
ALE07360.1 ALE07360.1 ALE07445.1 ALE07445.1 ALE07409.1 ALE07409.1 ALE04911.1 ALE04911.1 ALE07550.1 ALE07550.1 ALE05366.1 ALE05366.1 ALE05412.1 ALE05412.1 ALE05788.1 ALE05788.1 ALE05799.1 ALE05799.1 ureC ureC ALE06008.1 ALE06008.1 ALE06968.1 ALE06968.1 ALE08002.1 ALE08002.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALE07360.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
ALE07445.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)
ALE07409.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
ALE04911.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
ALE07550.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
ALE05366.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
ALE05412.1N-acyl-D-amino acid deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)
ALE05788.1Allantoicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (463 aa)
ALE05799.18-oxoguanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)
ureCUrease subunit alpha; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; Derived by automated computational analysis using gene prediction method: Protein Homology. (570 aa)
ALE06008.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (548 aa)
ALE06968.1N-isopropylammelide isopropylaminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
ALE08002.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
Your Current Organism:
Arthrobacter sp. ERGS101
NCBI taxonomy Id: 1704044
Other names: A. sp. ERGS1:01, Arthrobacter sp. ERGS1:01
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