STRINGSTRING
ssaV ssaV fliR fliR ALJ56895.1 ALJ56895.1 fliP fliP nolT nolT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ssaVSecretion system apparatus protein SsaV. (698 aa)
fliRFlagellar biosynthetic protein FliR. (259 aa)
ALJ56895.1Flagellar biosynthesis protein FliQ. (92 aa)
fliPFlagellar biosynthetic protein FliP precursor. (220 aa)
nolTNodulation protein NolT precursor. (273 aa)
Your Current Organism:
Xiphinematobacter sp. Idaho
NCBI taxonomy Id: 1704307
Other names: C. Xiphinematobacter sp. Idaho Grape, Candidatus Xiphinematobacter sp. Idaho Grape
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