STRINGSTRING
GDF3 GDF3 LOC112391706 LOC112391706 TFCP2L1 TFCP2L1 ESRRB ESRRB POU5F1 POU5F1 LOC112397231 LOC112397231 LMCD1 LMCD1 FOXH1 FOXH1 LOC112397240 LOC112397240 TBX3 TBX3 SOX17 SOX17 LOC112398901 LOC112398901 TBXT TBXT SOX7 SOX7 POU5F2 POU5F2 NES NES SALL4 SALL4 TDGF1 TDGF1 LOC112404952 LOC112404952 EOMES EOMES LOC112404954 LOC112404954 MIXL1 MIXL1 KLF4 KLF4 KLF5 KLF5 LOC112405533 LOC112405533 LOC112405613 LOC112405613 FBXO15 FBXO15 LOC112406365 LOC112406365 GATA6 GATA6 LOC112409816 LOC112409816 KLF17 KLF17 KLF18 KLF18 NODAL NODAL KLF2 KLF2 GDF1 GDF1 SOX2 SOX2 ARGFX ARGFX
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GDF3Growth/differentiation factor 3. (364 aa)
LOC112391706Homeobox protein NANOG-like. (225 aa)
TFCP2L1Transcription factor CP2-like protein 1 isoform X1. (489 aa)
ESRRBSteroid hormone receptor ERR2 isoform X1. (454 aa)
POU5F1POU domain protein. (363 aa)
LOC112397231Steroid hormone receptor ERR2-like. (200 aa)
LMCD1LIM and cysteine-rich domains protein 1 isoform X1. (363 aa)
FOXH1Forkhead box protein H1. (360 aa)
LOC112397240Steroid hormone receptor ERR2-like. (206 aa)
TBX3LOW QUALITY PROTEIN: T-box transcription factor TBX3. (734 aa)
SOX17LOW QUALITY PROTEIN: transcription factor SOX-17. (207 aa)
LOC112398901Transcription factor CP2-like protein 1 isoform X1. (516 aa)
TBXTBrachyury protein isoform X1. (435 aa)
SOX7Transcription factor SOX-7. (320 aa)
POU5F2POU domain protein. (335 aa)
NESLOW QUALITY PROTEIN: nestin; Belongs to the intermediate filament family. (1538 aa)
SALL4Sal-like protein 4 isoform X1. (1055 aa)
TDGF1Growth factor; Belongs to the EGF-CFC (Cripto-1/FRL1/Cryptic) family. (186 aa)
LOC112404952Left-right determination factor 2-like. (217 aa)
EOMESLOW QUALITY PROTEIN: eomesodermin homolog. (703 aa)
LOC112404954Left-right determination factor 2-like. (252 aa)
MIXL1Homeobox protein MIXL1. (237 aa)
KLF4Krueppel-like factor 4 isoform X1. (515 aa)
KLF5Krueppel-like factor 5. (454 aa)
LOC112405533SCAN domain-containing protein 3-like. (161 aa)
LOC112405613LOW QUALITY PROTEIN: alpha-fetoprotein-like. (613 aa)
FBXO15F-box only protein 15 isoform X1. (519 aa)
LOC112406365LOW QUALITY PROTEIN: homeobox protein NANOG-like. (294 aa)
GATA6Transcription factor GATA-6. (448 aa)
LOC112409816LOW QUALITY PROTEIN: protein lin-28 homolog A-like. (207 aa)
KLF17Krueppel-like factor 17. (363 aa)
KLF18LOW QUALITY PROTEIN: Kruppel like factor 18. (492 aa)
NODALNodal homolog. (348 aa)
KLF2Krueppel-like factor 2. (222 aa)
GDF1Embryonic growth/differentiation factor 1. (203 aa)
SOX2Transcription factor SOX-2. (327 aa)
ARGFXLOW QUALITY PROTEIN: arginine-fifty homeobox. (257 aa)
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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