5 items (Neophocaena asiaeorientalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HMGA2	High mobility group protein HMGI-C. (109 aa)
	NUDCD3	nudC domain-containing protein 3. (353 aa)
	AARSD1	alanyl-tRNA editing protein Aarsd1 isoform X1. (412 aa)
	GTPBP1	GTP-binding protein 1 isoform X1. (669 aa)
	HMGA1	High mobility group protein HMG-I/HMG-Y isoform X1. (288 aa)

Your Current Organism:

Neophocaena asiaeorientalis

NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AARSD1	GTPBP1	A0A341BA50	A0A341CSK8	alanyl-tRNA editing protein Aarsd1 isoform X1.	GTP-binding protein 1 isoform X1.	0.656
AARSD1	HMGA1	A0A341BA50	A0A341D5H9	alanyl-tRNA editing protein Aarsd1 isoform X1.	High mobility group protein HMG-I/HMG-Y isoform X1.	0.497
AARSD1	NUDCD3	A0A341BA50	A0A341B9P2	alanyl-tRNA editing protein Aarsd1 isoform X1.	nudC domain-containing protein 3.	0.545
GTPBP1	AARSD1	A0A341CSK8	A0A341BA50	GTP-binding protein 1 isoform X1.	alanyl-tRNA editing protein Aarsd1 isoform X1.	0.656
GTPBP1	HMGA1	A0A341CSK8	A0A341D5H9	GTP-binding protein 1 isoform X1.	High mobility group protein HMG-I/HMG-Y isoform X1.	0.520
GTPBP1	NUDCD3	A0A341CSK8	A0A341B9P2	GTP-binding protein 1 isoform X1.	nudC domain-containing protein 3.	0.784
HMGA1	AARSD1	A0A341D5H9	A0A341BA50	High mobility group protein HMG-I/HMG-Y isoform X1.	alanyl-tRNA editing protein Aarsd1 isoform X1.	0.497
HMGA1	GTPBP1	A0A341D5H9	A0A341CSK8	High mobility group protein HMG-I/HMG-Y isoform X1.	GTP-binding protein 1 isoform X1.	0.520
HMGA1	HMGA2	A0A341D5H9	A0A341AU31	High mobility group protein HMG-I/HMG-Y isoform X1.	High mobility group protein HMGI-C.	0.787
HMGA1	NUDCD3	A0A341D5H9	A0A341B9P2	High mobility group protein HMG-I/HMG-Y isoform X1.	nudC domain-containing protein 3.	0.449
HMGA2	HMGA1	A0A341AU31	A0A341D5H9	High mobility group protein HMGI-C.	High mobility group protein HMG-I/HMG-Y isoform X1.	0.787
NUDCD3	AARSD1	A0A341B9P2	A0A341BA50	nudC domain-containing protein 3.	alanyl-tRNA editing protein Aarsd1 isoform X1.	0.545
NUDCD3	GTPBP1	A0A341B9P2	A0A341CSK8	nudC domain-containing protein 3.	GTP-binding protein 1 isoform X1.	0.784
NUDCD3	HMGA1	A0A341B9P2	A0A341D5H9	nudC domain-containing protein 3.	High mobility group protein HMG-I/HMG-Y isoform X1.	0.449