(15 nodes) mRNA editing complex, and N6-methyladenosine-containing RNA binding network (Neophocaena asiaeorientalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	IGF2BP3	Insulin-like growth factor 2 mRNA-binding protein 3 isoform X1. (579 aa)
	CBLL2	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase CBLL2. (210 aa)
	YTHDC1	YTH domain-containing protein 1 isoform X1. (737 aa)
	RBM15	Putative RNA-binding protein 15. (962 aa)
	METTL14	N6-adenosine-methyltransferase non-catalytic subunit; Belongs to the MT-A70-like family. (456 aa)
	RBM15B	Putative RNA-binding protein 15B. (571 aa)
	WTAP	pre-mRNA-splicing regulator WTAP. (319 aa)
	FTO	Alpha-ketoglutarate-dependent dioxygenase FTO isoform X1. (505 aa)
	YTHDF1	LOW QUALITY PROTEIN: YTH domain-containing family protein 1. (512 aa)
	ALKBH5	RNA demethylase ALKBH5. (399 aa)
	ZC3H13	Zinc finger CCCH domain-containing protein 13 isoform X1. (1676 aa)
	METTL3	N6-adenosine-methyltransferase catalytic subunit; Belongs to the MT-A70-like family. (580 aa)
	VIRMA	Protein virilizer homolog isoform X1. (1812 aa)
	YTHDF2	YTH domain-containing family protein 2 isoform X1. (580 aa)
	IGF2BP2	Insulin-like growth factor 2 mRNA-binding protein 2 isoform X1. (599 aa)

Your Current Organism:

Neophocaena asiaeorientalis

NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALKBH5	CBLL2	A0A341C2I3	A0A341AXG5	RNA demethylase ALKBH5.	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase CBLL2.	0.478
ALKBH5	FTO	A0A341C2I3	A0A341BN86	RNA demethylase ALKBH5.	Alpha-ketoglutarate-dependent dioxygenase FTO isoform X1.	0.920
ALKBH5	IGF2BP2	A0A341C2I3	A0A341DAK9	RNA demethylase ALKBH5.	Insulin-like growth factor 2 mRNA-binding protein 2 isoform X1.	0.634
ALKBH5	IGF2BP3	A0A341C2I3	A0A341AXF8	RNA demethylase ALKBH5.	Insulin-like growth factor 2 mRNA-binding protein 3 isoform X1.	0.648
ALKBH5	METTL14	A0A341C2I3	A0A341BE28	RNA demethylase ALKBH5.	N6-adenosine-methyltransferase non-catalytic subunit; Belongs to the MT-A70-like family.	0.777
ALKBH5	METTL3	A0A341C2I3	A0A341CRT6	RNA demethylase ALKBH5.	N6-adenosine-methyltransferase catalytic subunit; Belongs to the MT-A70-like family.	0.736
ALKBH5	RBM15	A0A341C2I3	A0A341B888	RNA demethylase ALKBH5.	Putative RNA-binding protein 15.	0.734
ALKBH5	RBM15B	A0A341C2I3	A0A341BHM6	RNA demethylase ALKBH5.	Putative RNA-binding protein 15B.	0.770
ALKBH5	VIRMA	A0A341C2I3	A0A341D2J6	RNA demethylase ALKBH5.	Protein virilizer homolog isoform X1.	0.709
ALKBH5	WTAP	A0A341C2I3	A0A341BLI2	RNA demethylase ALKBH5.	pre-mRNA-splicing regulator WTAP.	0.890
ALKBH5	YTHDC1	A0A341C2I3	A0A341B3F4	RNA demethylase ALKBH5.	YTH domain-containing protein 1 isoform X1.	0.735
ALKBH5	YTHDF1	A0A341C2I3	A0A341BW25	RNA demethylase ALKBH5.	LOW QUALITY PROTEIN: YTH domain-containing family protein 1.	0.740
ALKBH5	YTHDF2	A0A341C2I3	A0A341D600	RNA demethylase ALKBH5.	YTH domain-containing family protein 2 isoform X1.	0.740
ALKBH5	ZC3H13	A0A341C2I3	A0A341CB79	RNA demethylase ALKBH5.	Zinc finger CCCH domain-containing protein 13 isoform X1.	0.734
CBLL2	ALKBH5	A0A341AXG5	A0A341C2I3	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase CBLL2.	RNA demethylase ALKBH5.	0.478
CBLL2	FTO	A0A341AXG5	A0A341BN86	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase CBLL2.	Alpha-ketoglutarate-dependent dioxygenase FTO isoform X1.	0.461
CBLL2	METTL14	A0A341AXG5	A0A341BE28	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase CBLL2.	N6-adenosine-methyltransferase non-catalytic subunit; Belongs to the MT-A70-like family.	0.715
CBLL2	METTL3	A0A341AXG5	A0A341CRT6	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase CBLL2.	N6-adenosine-methyltransferase catalytic subunit; Belongs to the MT-A70-like family.	0.531
CBLL2	RBM15	A0A341AXG5	A0A341B888	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase CBLL2.	Putative RNA-binding protein 15.	0.711
CBLL2	RBM15B	A0A341AXG5	A0A341BHM6	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase CBLL2.	Putative RNA-binding protein 15B.	0.651