36 items (Neophocaena asiaeorientalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPS13	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	RPS29	40S ribosomal protein S29. (56 aa)
	RPL13	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
	RPS23	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	RPS20	40S ribosomal protein S20. (119 aa)
	RPS24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (143 aa)
	RPS5	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (204 aa)
	RPS9	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
	EEF2	Elongation factor 2. (858 aa)
	RPL36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (105 aa)
	RPS28	40S ribosomal protein S28. (69 aa)
	RPL29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (173 aa)
	LOC112400917	LOW QUALITY PROTEIN: 40S ribosomal protein SA-like; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family. (364 aa)
	RPS6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	RPLP2	60S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
	RPS21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (81 aa)
	RPS25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (125 aa)
	LOC112406517	40S ribosomal protein S3a; May play a role during erythropoiesis through regulation of transcription factor DDIT3. (457 aa)
	RPS7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
	RPL27A	60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
	LOC112409079	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (132 aa)
	LOC112409552	40S ribosomal protein S19-like. (145 aa)
	RPS2	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (296 aa)
	RPL38	60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
	RPL7A	60S ribosomal protein L7a. (266 aa)
	RPL12	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	RPS8	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
	RPS3A	40S ribosomal protein S3a; May play a role during erythropoiesis through regulation of transcription factor DDIT3. (264 aa)
	RPS10	40S ribosomal protein S10. (165 aa)
	RPS17	40S ribosomal protein S17. (135 aa)
	RPL18A	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	RPS18	40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	RACK1	Receptor of activated protein C kinase 1. (317 aa)
	RPS11	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (158 aa)
	RPS16	40S ribosomal protein S16 isoform X1. (154 aa)
	RPS19	40S ribosomal protein S19. (145 aa)

Your Current Organism:

Neophocaena asiaeorientalis

NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEF2	LOC112400917	A0A341BFI8	A0A341BLQ1	Elongation factor 2.	LOW QUALITY PROTEIN: 40S ribosomal protein SA-like; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family.	0.988
EEF2	LOC112406517	A0A341BFI8	A0A341C8H5	Elongation factor 2.	40S ribosomal protein S3a; May play a role during erythropoiesis through regulation of transcription factor DDIT3.	0.981
EEF2	LOC112409079	A0A341BFI8	A0A341CIY6	Elongation factor 2.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.998
EEF2	LOC112409552	A0A341BFI8	A0A341CL47	Elongation factor 2.	40S ribosomal protein S19-like.	0.970
EEF2	RACK1	A0A341BFI8	A0A341DAP4	Elongation factor 2.	Receptor of activated protein C kinase 1.	0.999
EEF2	RPL12	A0A341BFI8	A0A341CUT5	Elongation factor 2.	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.963
EEF2	RPL13	A0A341BFI8	A0A341ALF5	Elongation factor 2.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.999
EEF2	RPL18A	A0A341BFI8	A0A341D7Y5	Elongation factor 2.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
EEF2	RPL27A	A0A341BFI8	A0A341CFU5	Elongation factor 2.	60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.	0.998
EEF2	RPL29	A0A341BFI8	A0A341BJ15	Elongation factor 2.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.992
EEF2	RPL36	A0A341BFI8	A0A341BH18	Elongation factor 2.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.996
EEF2	RPL38	A0A341BFI8	A0A341CQ78	Elongation factor 2.	60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.	0.997
EEF2	RPL7A	A0A341BFI8	A0A341CUR7	Elongation factor 2.	60S ribosomal protein L7a.	0.999
EEF2	RPLP2	A0A341BFI8	A0A341BQ02	Elongation factor 2.	60S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.960
EEF2	RPS10	A0A341BFI8	A0A341D505	Elongation factor 2.	40S ribosomal protein S10.	0.997
EEF2	RPS11	A0A341BFI8	A0A341DBH9	Elongation factor 2.	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.998
EEF2	RPS13	A0A341BFI8	A0A341A9N2	Elongation factor 2.	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.998
EEF2	RPS16	A0A341BFI8	A0A341DBX6	Elongation factor 2.	40S ribosomal protein S16 isoform X1.	0.999
EEF2	RPS17	A0A341BFI8	A0A341D610	Elongation factor 2.	40S ribosomal protein S17.	0.921
EEF2	RPS18	A0A341BFI8	A0A341D7Y9	Elongation factor 2.	40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.998