STRINGSTRING
UTP20 UTP20 WDR43 WDR43 EMG1 EMG1 UTP15 UTP15 WDR75 WDR75 EXOSC1 EXOSC1 DDX47 DDX47 RCL1 RCL1 EXOSC3 EXOSC3 EXOSC6 EXOSC6 PDCD11 PDCD11 DIS3L DIS3L KRR1 KRR1 MPHOSPH6 MPHOSPH6 UTP6 UTP6 LOC112394673 LOC112394673 PMEL PMEL SNU13 SNU13 RRP7A RRP7A FCF1 FCF1 NOL10 NOL10 NOC4L NOC4L UTP11 UTP11 EXOSC4 EXOSC4 C1D C1D MCC MCC MPHOSPH10 MPHOSPH10 GLMN GLMN NCOA6 NCOA6 NOP56 NOP56 WDR36 WDR36 DCAF13 DCAF13 EXOSC9 EXOSC9 NOP14 NOP14 RRP9 RRP9 IMP4 IMP4 EXOSC10 EXOSC10 DNTTIP2 DNTTIP2 RTCA RTCA UTP25 UTP25 UTP18 UTP18 NAT10 NAT10 NGDN NGDN FBLL1 FBLL1 DIS3 DIS3 NOL6 NOL6 UTP3 UTP3 EXOSC8 EXOSC8 AATF AATF DDX52 DDX52 NOP58 NOP58 PWP2 PWP2 DHX37 DHX37 UTP14A UTP14A TBL3 TBL3 HEATR1 HEATR1 EXOSC2 EXOSC2 UTP4 UTP4 BMS1 BMS1 WDR3 WDR3 MTREX MTREX EXOSC7 EXOSC7 DIMT1 DIMT1 WDR46 WDR46 LOC112414186 LOC112414186 BYSL BYSL DDX49 DDX49 EXOSC5 EXOSC5 FBL FBL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UTP20Small subunit processome component 20 homolog isoform X1. (2781 aa)
WDR43WD repeat-containing protein 43. (678 aa)
EMG1Ribosomal RNA small subunit methyltransferase NEP1 isoform X1. (244 aa)
UTP15U3 small nucleolar RNA-associated protein 15 homolog. (519 aa)
WDR75WD repeat-containing protein 75. (831 aa)
EXOSC1Exosome complex component CSL4 isoform X1. (195 aa)
DDX47Probable ATP-dependent RNA helicase DDX47; Belongs to the DEAD box helicase family. (455 aa)
RCL1RNA 3'-terminal phosphate cyclase-like protein. (373 aa)
EXOSC3Exosome complex component RRP40 isoform X1. (275 aa)
EXOSC6Exosome complex component MTR3. (275 aa)
PDCD11Protein RRP5 homolog isoform X1. (1875 aa)
DIS3LDIS3-like exonuclease 1 isoform X1; Belongs to the RNR ribonuclease family. (990 aa)
KRR1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (381 aa)
MPHOSPH6M-phase phosphoprotein 6 isoform X1. (160 aa)
UTP6U3 small nucleolar RNA-associated protein 6 homolog isoform X1. (598 aa)
LOC112394673U3 small nucleolar ribonucleoprotein protein IMP3-like. (141 aa)
PMELMelanocyte protein PMEL. (636 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
RRP7ARibosomal RNA-processing protein 7 homolog A. (280 aa)
FCF1rRNA-processing protein FCF1 homolog. (198 aa)
NOL10Nucleolar protein 10. (688 aa)
NOC4LNucleolar complex protein 4 homolog. (492 aa)
UTP11U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (253 aa)
EXOSC4Exosome complex component RRP41. (245 aa)
C1DNuclear nucleic acid-binding protein C1D. (141 aa)
MCCColorectal mutant cancer protein isoform X1. (829 aa)
MPHOSPH10U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (680 aa)
GLMNGlomulin. (592 aa)
NCOA6Nuclear receptor coactivator 6 isoform X1. (2039 aa)
NOP56Nucleolar protein 56 isoform X1. (488 aa)
WDR36WD repeat-containing protein 36. (895 aa)
DCAF13DDB1- and CUL4-associated factor 13. (445 aa)
EXOSC9Exosome complex component RRP45. (439 aa)
NOP14Nucleolar protein 14. (851 aa)
RRP9U3 small nucleolar RNA-interacting protein 2. (518 aa)
IMP4U3 small nucleolar ribonucleoprotein protein IMP4. (291 aa)
EXOSC10Exosome component 10 isoform X1. (957 aa)
DNTTIP2Deoxynucleotidyltransferase terminal-interacting protein 2 isoform X1. (770 aa)
RTCARNA 3'-terminal phosphate cyclase isoform X1. (366 aa)
UTP25Digestive organ expansion factor homolog isoform X1. (752 aa)
UTP18U3 small nucleolar RNA-associated protein 18 homolog. (552 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1026 aa)
NGDNNeuroguidin. (315 aa)
FBLL1rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1. (336 aa)
DIS3Exosome complex exonuclease RRP44 isoform X1; Belongs to the RNR ribonuclease family. (958 aa)
NOL6Nucleolar protein 6. (1144 aa)
UTP3Something about silencing protein 10. (471 aa)
EXOSC8Exosome complex component RRP43. (276 aa)
AATFProtein AATF. (566 aa)
DDX52Probable ATP-dependent RNA helicase DDX52. (598 aa)
NOP58Nucleolar protein 58 isoform X1. (537 aa)
PWP2Periodic tryptophan protein 2 homolog. (912 aa)
DHX37Probable ATP-dependent RNA helicase DHX37 isoform X1. (1146 aa)
UTP14AU3 small nucleolar RNA-associated protein 14 homolog A isoform X1. (772 aa)
TBL3Transducin beta-like protein 3. (800 aa)
HEATR1HEAT repeat-containing protein 1 isoform X1. (2141 aa)
EXOSC2Exosome complex component RRP4. (293 aa)
UTP4U3 small nucleolar RNA-associated protein 4 homolog. (686 aa)
BMS1Ribosome biogenesis protein BMS1 homolog. (1284 aa)
WDR3WD repeat-containing protein 3 isoform X1. (943 aa)
MTREXExosome RNA helicase MTR4. (1040 aa)
EXOSC7Exosome complex component RRP42. (291 aa)
DIMT1rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (317 aa)
WDR46WD repeat-containing protein 46. (611 aa)
LOC112414186LOW QUALITY PROTEIN: importin-7-like. (1040 aa)
BYSLBystin. (433 aa)
DDX49Probable ATP-dependent RNA helicase DDX49; Belongs to the DEAD box helicase family. (483 aa)
EXOSC5Exosome complex component RRP46 isoform X1. (235 aa)
FBLrRNA 2'-O-methyltransferase fibrillarin isoform X1. (329 aa)
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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