STRINGSTRING
BOC BOC SHH SHH CDON CDON PTCH1 PTCH1 GAS1 GAS1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BOCBrother of CDO isoform X1. (1116 aa)
SHHSonic hedgehog protein. (328 aa)
CDONCell adhesion molecule-related/down-regulated by oncogenes. (1279 aa)
PTCH1Protein patched homolog 1 isoform X1. (1297 aa)
GAS1LOW QUALITY PROTEIN: growth arrest-specific protein 1. (332 aa)
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.