STRINGSTRING
GTF2B GTF2B MYOD1 MYOD1 SLC30A9 SLC30A9 CRY1 CRY1 LOC112392022 LOC112392022 ACTN4 ACTN4 LOC112392034 LOC112392034 SMAD3 SMAD3 TRIP4 TRIP4 NR4A3 NR4A3 LCOR LCOR MMS19 MMS19 RARG RARG NR4A2 NR4A2 NR4A1 NR4A1 VDR VDR GRIP1 GRIP1 SNW1 SNW1 TOB2 TOB2 EP300 EP300 NRIP1 NRIP1 THRAP3 THRAP3 PPARGC1B PPARGC1B NCOA2 NCOA2 LOC112395837 LOC112395837 MED16 MED16 MED30 MED30 C1D C1D TRIM24 TRIM24 FOXH1 FOXH1 LEF1 LEF1 LRIF1 LRIF1 DDX54 DDX54 MED1 MED1 MED17 MED17 KDM3A KDM3A NR0B1 NR0B1 NCOA6 NCOA6 ASXL1 ASXL1 TGFB1I1 TGFB1I1 ARID5A ARID5A DCAF13 DCAF13 PRKCB PRKCB LOC112399174 LOC112399174 PAGR1 PAGR1 MED24 MED24 SMARCE1 SMARCE1 NSD1 NSD1 ZBTB7A ZBTB7A BUD31 BUD31 PPARGC1A PPARGC1A DCAF1 DCAF1 TAF7L TAF7L SMARCA4 SMARCA4 NCOA3 NCOA3 FOXP1 FOXP1 PPID PPID NKX3-1 NKX3-1 LATS1 LATS1 TMF1 TMF1 PRMT2 PRMT2 ESR1 ESR1 HIF1A HIF1A CRY2 CRY2 NR1H3 NR1H3 PARK7 PARK7 CNOT1 CNOT1 PADI2 PADI2 SRARP SRARP PRPF6 PRPF6 NR1H4 NR1H4 CTBP2 CTBP2 PROX1 PROX1 RNF14 RNF14 LOC112404478 LOC112404478 TRIM68 TRIM68 LOC112404477 LOC112404477 LOC112404351 LOC112404351 NCOR1 NCOR1 STRN STRN CTNNB1 CTNNB1 SMARCD3 SMARCD3 MED4 MED4 LOC112406619 LOC112406619 RNF6 RNF6 TACC2 TACC2 TCF7L2 TCF7L2 ZNF366 ZNF366 TAF10 TAF10 MED13 MED13 BCAS3 BCAS3 MED12 MED12 CCDC62 CCDC62 NCOA7 NCOA7 TCF21 TCF21 LOC112409758 LOC112409758 WIPI1 WIPI1 DDX5 DDX5 LOC112410963 LOC112410963 LOC112410884 LOC112410884 RXRA RXRA PRAME PRAME NCOA1 NCOA1 TADA3 TADA3 GTF2H1 GTF2H1 NRBF2 NRBF2 TACC1 TACC1 SIRT1 SIRT1 KDM1A KDM1A DAXX DAXX ARID1A ARID1A PKN1 PKN1 DNAAF4 DNAAF4 CALR CALR YWHAH YWHAH MED25 MED25 NR1H2 NR1H2 LOC112415963 LOC112415963 NR1I2 NR1I2 ARGFX ARGFX CRX CRX
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GTF2BTranscription initiation factor IIB. (316 aa)
MYOD1Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (319 aa)
SLC30A9Zinc transporter 9. (565 aa)
CRY1Cryptochrome-1 isoform X1. (587 aa)
LOC112392022Transcription initiation factor TFIID subunit 7. (146 aa)
ACTN4Alpha-actinin-4 isoform X2. (827 aa)
LOC112392034Signal transducer and activator of transcription 5A-like. (105 aa)
SMAD3Mothers against decapentaplegic homolog. (376 aa)
TRIP4Activating signal cointegrator 1 isoform X1. (583 aa)
NR4A3Nuclear receptor subfamily 4 group A member 3. (641 aa)
LCORLigand-dependent corepressor isoform X4. (1714 aa)
MMS19MMS19 nucleotide excision repair protein homolog isoform X2. (1029 aa)
RARGRetinoic acid receptor gamma isoform X2. (458 aa)
NR4A2Nuclear receptor subfamily 4 group A member 2. (598 aa)
NR4A1Nuclear receptor subfamily 4 group A member 1. (593 aa)
VDRVitamin D3 receptor. (427 aa)
GRIP1Glutamate receptor-interacting protein 1 isoform X1. (1003 aa)
SNW1SNW domain-containing protein 1. (536 aa)
TOB2Protein Tob2. (343 aa)
EP300Histone acetyltransferase p300. (2399 aa)
NRIP1Nuclear receptor-interacting protein 1. (1156 aa)
THRAP3Thyroid hormone receptor-associated protein 3. (958 aa)
PPARGC1BPeroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1. (1019 aa)
NCOA2Nuclear receptor coactivator. (1464 aa)
LOC112395837LOW QUALITY PROTEIN: calreticulin-like. (540 aa)
MED16Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (829 aa)
MED30Mediator of RNA polymerase II transcription subunit 30. (178 aa)
C1DNuclear nucleic acid-binding protein C1D. (141 aa)
TRIM24Transcription intermediary factor 1-alpha isoform X1. (1050 aa)
FOXH1Forkhead box protein H1. (360 aa)
LEF1Lymphoid enhancer-binding factor 1 isoform X1. (414 aa)
LRIF1Ligand-dependent nuclear receptor-interacting factor 1 isoform X1. (762 aa)
DDX54ATP-dependent RNA helicase DDX54; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (876 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1579 aa)
MED17Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (651 aa)
KDM3ALysine-specific demethylase 3A isoform X1. (1322 aa)
NR0B1Nuclear receptor subfamily 0 group B member 1. (464 aa)
NCOA6Nuclear receptor coactivator 6 isoform X1. (2039 aa)
ASXL1Putative Polycomb group protein ASXL1. (1517 aa)
TGFB1I1Transforming growth factor beta-1-induced transcript 1 protein isoform X1; Belongs to the paxillin family. (456 aa)
ARID5AAT-rich interactive domain-containing protein 5A isoform X1. (593 aa)
DCAF13DDB1- and CUL4-associated factor 13. (445 aa)
PRKCBProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (673 aa)
LOC112399174Signal transducer and activator of transcription. (618 aa)
PAGR1PAXIP1-associated glutamate-rich protein 1. (254 aa)
MED24Mediator of RNA polymerase II transcription subunit 24 isoform X1. (999 aa)
SMARCE1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1. (411 aa)
NSD1LOW QUALITY PROTEIN: histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific. (2701 aa)
ZBTB7AZinc finger and BTB domain-containing protein 7A. (519 aa)
BUD31Protein BUD31 homolog isoform X1. (149 aa)
PPARGC1APeroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1. (799 aa)
DCAF1DDB1- and CUL4-associated factor 1 isoform X1. (1587 aa)
TAF7LTranscription initiation factor TFIID subunit 7-like. (453 aa)
SMARCA4Transcription activator BRG1 isoform X2. (1649 aa)
NCOA3Nuclear receptor coactivator. (1400 aa)
FOXP1Forkhead box protein P1 isoform X1. (673 aa)
PPIDPeptidyl-prolyl cis-trans isomerase D isoform X1. (370 aa)
NKX3-1Homeobox protein Nkx-3.1. (241 aa)
LATS1Serine/threonine-protein kinase LATS1. (1128 aa)
TMF1TATA element modulatory factor isoform X1. (1093 aa)
PRMT2Protein arginine N-methyltransferase 2 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (464 aa)
ESR1Estrogen receptor. (604 aa)
HIF1AHypoxia-inducible factor 1-alpha. (823 aa)
CRY2Cryptochrome-2 isoform X1. (638 aa)
NR1H3Oxysterols receptor LXR-alpha isoform X1. (447 aa)
PARK7Protein/nucleic acid deglycase DJ-1. (189 aa)
CNOT1CCR4-NOT transcription complex subunit 1 isoform X1. (2383 aa)
PADI2Protein-arginine deiminase type-2 isoform X1. (665 aa)
SRARPSteroid receptor-associated and regulated protein. (251 aa)
PRPF6pre-mRNA-processing factor 6. (941 aa)
NR1H4Bile acid receptor isoform X1. (486 aa)
CTBP2C-terminal-binding protein 2 isoform X1. (983 aa)
PROX1Prospero homeobox protein 1 isoform X1. (737 aa)
RNF14RBR-type E3 ubiquitin transferase. (474 aa)
LOC112404478Bromodomain-containing protein 8-like. (236 aa)
TRIM68E3 ubiquitin-protein ligase TRIM68 isoform X1. (533 aa)
LOC112404477Bromodomain-containing protein 8-like. (101 aa)
LOC112404351Bromodomain-containing protein 8 isoform X1. (951 aa)
NCOR1Nuclear receptor corepressor 1 isoform X1. (2454 aa)
STRNStriatin isoform X1. (809 aa)
CTNNB1Catenin beta-1. (781 aa)
SMARCD3annotation not available (495 aa)
MED4Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (270 aa)
LOC112406619Nuclear receptor-binding factor 2-like isoform X1. (232 aa)
RNF6E3 ubiquitin-protein ligase RNF6 isoform X1. (663 aa)
TACC2Transforming acidic coiled-coil-containing protein 2 isoform X1. (2883 aa)
TCF7L2Transcription factor 7-like 2 isoform X1. (510 aa)
ZNF366Zinc finger protein 366. (748 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (152 aa)
MED13Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (2381 aa)
BCAS3Breast carcinoma-amplified sequence 3 isoform X1. (929 aa)
MED12Mediator of RNA polymerase II transcription subunit 12. (2097 aa)
CCDC62Coiled-coil domain-containing protein 62. (679 aa)
NCOA7Nuclear receptor coactivator 7 isoform X1. (943 aa)
TCF21Transcription factor 21. (179 aa)
LOC112409758Melanoma antigen preferentially expressed in tumors-like. (516 aa)
WIPI1WD repeat domain phosphoinositide-interacting protein 1. (447 aa)
DDX5Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (614 aa)
LOC112410963Transcription initiation factor TFIID subunit 7-like. (179 aa)
LOC112410884LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase D-like. (370 aa)
RXRARetinoic acid receptor RXR-alpha. (439 aa)
PRAMEMelanoma antigen preferentially expressed in tumors. (111 aa)
NCOA1Nuclear receptor coactivator. (1441 aa)
TADA3Transcriptional adapter 3. (432 aa)
GTF2H1General transcription factor IIH subunit 1. (548 aa)
NRBF2Nuclear receptor-binding factor 2 isoform X1. (288 aa)
TACC1Transforming acidic coiled-coil-containing protein 1 isoform X1. (798 aa)
SIRT1NAD-dependent protein deacetylase sirtuin-1 isoform X1. (557 aa)
KDM1ALysine-specific histone demethylase 1A. (730 aa)
DAXXDeath domain-associated protein 6. (789 aa)
ARID1AAT-rich interactive domain-containing protein 1A isoform X1. (2285 aa)
PKN1Serine/threonine-protein kinase N1 isoform X1. (950 aa)
DNAAF4Dynein assembly factor 4, axonemal isoform X1. (420 aa)
CALRCalreticulin. (417 aa)
YWHAH14-3-3 protein eta; Belongs to the 14-3-3 family. (220 aa)
MED25Mediator of RNA polymerase II transcription subunit 25. (718 aa)
NR1H2Oxysterols receptor LXR-beta isoform X1. (450 aa)
LOC112415963Lysine-specific demethylase 5D-like isoform X1. (1606 aa)
NR1I2LOW QUALITY PROTEIN: nuclear receptor subfamily 1 group I member 2. (324 aa)
ARGFXLOW QUALITY PROTEIN: arginine-fifty homeobox. (257 aa)
CRXCone-rod homeobox protein. (299 aa)
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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