23 items (Neophocaena asiaeorientalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CCDC47	Coiled-coil domain-containing protein 47. (483 aa)
	RPS29	40S ribosomal protein S29. (56 aa)
	SEC61A2	Protein transport protein Sec61 subunit alpha isoform X1. (423 aa)
	SEC61B	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (96 aa)
	TMEM97	Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins. (177 aa)
	ZC3H12A	Endoribonuclease ZC3H12A. (583 aa)
	SRPRA	Signal recognition particle receptor subunit alpha. (639 aa)
	LOC112399435	Protein transport protein Sec61 subunit gamma-like. (68 aa)
	RPS28	40S ribosomal protein S28. (69 aa)
	RPL27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	EPM2A	Laforin isoform X1. (331 aa)
	PLOD1	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X1. (735 aa)
	UBA1	Ubiquitin-like modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family. (1058 aa)
	SEC63	Translocation protein SEC63 homolog. (760 aa)
	RPL35	60S ribosomal protein L35. (123 aa)
	PI4KB	Phosphatidylinositol 4-kinase beta isoform X1; Belongs to the PI3/PI4-kinase family. (816 aa)
	SEC61A1	Protein transport protein Sec61 subunit alpha. (476 aa)
	SEC61G	Protein transport protein Sec61 subunit gamma. (68 aa)
	RPS17	40S ribosomal protein S17. (135 aa)
	RPL11	60S ribosomal protein L11 isoform X1; Belongs to the universal ribosomal protein uL5 family. (195 aa)
	LOC112414501	LOW QUALITY PROTEIN: protein transport protein Sec61 subunit alpha-like; Belongs to the SecY/SEC61-alpha family. (450 aa)
	MACO1	Macoilin. (647 aa)
	LOC112415716	Ubiquitin-like modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family. (1067 aa)

Your Current Organism:

Neophocaena asiaeorientalis

NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCDC47	LOC112399435	A0A341CQ17	A0A341BBY2	Coiled-coil domain-containing protein 47.	Protein transport protein Sec61 subunit gamma-like.	0.809
CCDC47	LOC112414501	A0A341CQ17	A0A341D788	Coiled-coil domain-containing protein 47.	LOW QUALITY PROTEIN: protein transport protein Sec61 subunit alpha-like; Belongs to the SecY/SEC61-alpha family.	0.918
CCDC47	RPL11	A0A341CQ17	A0A341D6Z7	Coiled-coil domain-containing protein 47.	60S ribosomal protein L11 isoform X1; Belongs to the universal ribosomal protein uL5 family.	0.818
CCDC47	RPL27	A0A341CQ17	A0A341BI05	Coiled-coil domain-containing protein 47.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.914
CCDC47	RPL35	A0A341CQ17	A0A341CUV7	Coiled-coil domain-containing protein 47.	60S ribosomal protein L35.	0.914
CCDC47	SEC61A1	A0A341CQ17	A0A341CWP8	Coiled-coil domain-containing protein 47.	Protein transport protein Sec61 subunit alpha.	0.918
CCDC47	SEC61A2	A0A341CQ17	A0A341AGV6	Coiled-coil domain-containing protein 47.	Protein transport protein Sec61 subunit alpha isoform X1.	0.918
CCDC47	SEC61B	A0A341CQ17	A0A341AHJ5	Coiled-coil domain-containing protein 47.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.914
CCDC47	SEC61G	A0A341CQ17	A0A341D0G5	Coiled-coil domain-containing protein 47.	Protein transport protein Sec61 subunit gamma.	0.809
CCDC47	SEC63	A0A341CQ17	A0A341CAL6	Coiled-coil domain-containing protein 47.	Translocation protein SEC63 homolog.	0.526
LOC112399435	CCDC47	A0A341BBY2	A0A341CQ17	Protein transport protein Sec61 subunit gamma-like.	Coiled-coil domain-containing protein 47.	0.809
LOC112399435	LOC112414501	A0A341BBY2	A0A341D788	Protein transport protein Sec61 subunit gamma-like.	LOW QUALITY PROTEIN: protein transport protein Sec61 subunit alpha-like; Belongs to the SecY/SEC61-alpha family.	0.969
LOC112399435	RPL11	A0A341BBY2	A0A341D6Z7	Protein transport protein Sec61 subunit gamma-like.	60S ribosomal protein L11 isoform X1; Belongs to the universal ribosomal protein uL5 family.	0.915
LOC112399435	RPL27	A0A341BBY2	A0A341BI05	Protein transport protein Sec61 subunit gamma-like.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
LOC112399435	RPL35	A0A341BBY2	A0A341CUV7	Protein transport protein Sec61 subunit gamma-like.	60S ribosomal protein L35.	0.999
LOC112399435	RPS17	A0A341BBY2	A0A341D610	Protein transport protein Sec61 subunit gamma-like.	40S ribosomal protein S17.	0.837
LOC112399435	RPS28	A0A341BBY2	A0A341BHM9	Protein transport protein Sec61 subunit gamma-like.	40S ribosomal protein S28.	0.874
LOC112399435	RPS29	A0A341BBY2	A0A341AEP9	Protein transport protein Sec61 subunit gamma-like.	40S ribosomal protein S29.	0.863
LOC112399435	SEC61A1	A0A341BBY2	A0A341CWP8	Protein transport protein Sec61 subunit gamma-like.	Protein transport protein Sec61 subunit alpha.	0.987
LOC112399435	SEC61A2	A0A341BBY2	A0A341AGV6	Protein transport protein Sec61 subunit gamma-like.	Protein transport protein Sec61 subunit alpha isoform X1.	0.969