STRINGSTRING
YIPF7 YIPF7 VTI1B VTI1B YIPF5 YIPF5 USO1 USO1 VTI1A VTI1A SEC22B SEC22B BET1 BET1 YIPF4 YIPF4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
YIPF7Protein YIPF. (255 aa)
VTI1BVesicle transport through interaction with t-SNAREs homolog 1B. (232 aa)
YIPF5Protein YIPF. (257 aa)
USO1General vesicular transport factor p115 isoform X1. (970 aa)
VTI1AVesicle transport through interaction with t-SNAREs homolog 1A isoform X1. (230 aa)
SEC22BVesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. (215 aa)
BET1BET1 homolog. (118 aa)
YIPF4Protein YIPF. (244 aa)
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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