STRINGSTRING
LOC112391722 LOC112391722 BMPR1A BMPR1A PHOX2B PHOX2B LOC112390775 LOC112390775 PDCD6 PDCD6 SEMA3C SEMA3C TCOF1 TCOF1 SEMA4D SEMA4D NOLC1 NOLC1 JAG1 JAG1 EDNRA EDNRA SEMA4G SEMA4G ACVR1 ACVR1 SEMA3F SEMA3F LOC112394195 LOC112394195 SEMA3A SEMA3A SEMA3E SEMA3E SEMA3B SEMA3B TWIST1 TWIST1 SEMA3D SEMA3D SHH SHH NRP2 NRP2 CDH2 CDH2 ISL1 ISL1 CITED2 CITED2 LOC112396048 LOC112396048 SEMA6D SEMA6D CORO1C CORO1C HTR2B HTR2B SNAI2 SNAI2 SEMA6A SEMA6A SEMA4C SEMA4C MAPK3 MAPK3 FGF2 FGF2 NRTN NRTN SEMA3G SEMA3G SEMA6B SEMA6B EFNB1 EFNB1 FAM172A FAM172A KBTBD8 KBTBD8 SEMA4A SEMA4A HIF1A HIF1A LAMA5 LAMA5 ANXA6 ANXA6 HAND2 HAND2 RET RET SETD2 SETD2 HES1 HES1 GBX2 GBX2 SEMA5A SEMA5A BCL2 BCL2 GDNF GDNF SEMA5B SEMA5B MSI2 MSI2 SOX8 SOX8 EDNRB EDNRB SOX9 SOX9 SOX10 SOX10 SMO SMO SEMA7A SEMA7A SEMA6C SEMA6C FN1 FN1 ERBB4 ERBB4 RADIL RADIL MAPK1 MAPK1 PTPRC PTPRC EDN1 EDN1 KLHL12 KLHL12 RDH10 RDH10 NRP1 NRP1 SEMA4F SEMA4F SEMA4B SEMA4B PEF1 PEF1 PHACTR4 PHACTR4 ALDH1A2 ALDH1A2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC112391722LOW QUALITY PROTEIN: nucleolar and coiled-body phosphoprotein 1-like. (718 aa)
BMPR1AReceptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (532 aa)
PHOX2BPaired mesoderm homeobox protein 2B. (262 aa)
LOC112390775Folate receptor alpha-like. (251 aa)
PDCD6Programmed cell death protein 6 isoform X1. (189 aa)
SEMA3Csemaphorin-3C; Belongs to the semaphorin family. (751 aa)
TCOF1Treacle protein isoform X1. (1499 aa)
SEMA4Dsemaphorin-4D; Belongs to the semaphorin family. (863 aa)
NOLC1Nucleolar and coiled-body phosphoprotein 1. (708 aa)
JAG1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1177 aa)
EDNRAEndothelin-1 receptor isoform X1; Belongs to the G-protein coupled receptor 1 family. (427 aa)
SEMA4Gsemaphorin-4G isoform X1; Belongs to the semaphorin family. (857 aa)
ACVR1Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (509 aa)
SEMA3Fsemaphorin-3F; Belongs to the semaphorin family. (744 aa)
LOC112394195ALX homeobox protein 1. (326 aa)
SEMA3Asemaphorin-3A; Belongs to the semaphorin family. (772 aa)
SEMA3Esemaphorin-3E; Belongs to the semaphorin family. (715 aa)
SEMA3Bsemaphorin-3B isoform X1; Belongs to the semaphorin family. (748 aa)
TWIST1LOW QUALITY PROTEIN: twist-related protein 1. (152 aa)
SEMA3Dsemaphorin-3D; Belongs to the semaphorin family. (777 aa)
SHHSonic hedgehog protein. (328 aa)
NRP2Neuropilin; Belongs to the neuropilin family. (931 aa)
CDH2Cadherin-2; Cadherins are calcium-dependent cell adhesion proteins. (995 aa)
ISL1Insulin gene enhancer protein ISL-1. (349 aa)
CITED2Cbp/p300-interacting transactivator 2. (263 aa)
LOC112396048Cytochrome P450 26C1; Belongs to the cytochrome P450 family. (489 aa)
SEMA6Dsemaphorin-6D isoform X1; Belongs to the semaphorin family. (1073 aa)
CORO1CCoronin; Belongs to the WD repeat coronin family. (474 aa)
HTR2B5-hydroxytryptamine receptor 2B. (479 aa)
SNAI2Zinc finger protein SNAI2. (268 aa)
SEMA6Asemaphorin-6A isoform X1; Belongs to the semaphorin family. (1044 aa)
SEMA4Csemaphorin-4C; Belongs to the semaphorin family. (833 aa)
MAPK3Mitogen-activated protein kinase 3. (265 aa)
FGF2Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (304 aa)
NRTNNeurturin. (197 aa)
SEMA3Gsemaphorin-3G isoform X1; Belongs to the semaphorin family. (773 aa)
SEMA6BLOW QUALITY PROTEIN: semaphorin-6B; Belongs to the semaphorin family. (516 aa)
EFNB1ephrin-B1 isoform X1; Belongs to the ephrin family. (346 aa)
FAM172AProtein FAM172A isoform X1. (416 aa)
KBTBD8Kelch repeat and BTB domain-containing protein 8 isoform X1. (601 aa)
SEMA4Asemaphorin-4A isoform X1; Belongs to the semaphorin family. (762 aa)
HIF1AHypoxia-inducible factor 1-alpha. (823 aa)
LAMA5LOW QUALITY PROTEIN: laminin subunit alpha-5. (3401 aa)
ANXA6Annexin. (673 aa)
HAND2Heart- and neural crest derivatives-expressed protein 2. (208 aa)
RETProto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1113 aa)
SETD2Histone-lysine N-methyltransferase SETD2 isoform X1. (2547 aa)
HES1Transcription factor HES-1. (280 aa)
GBX2Homeobox protein GBX-2 isoform X1. (348 aa)
SEMA5Asemaphorin-5A isoform X1. (1073 aa)
BCL2Apoptosis regulator Bcl-2 isoform X1. (233 aa)
GDNFGlial cell line-derived neurotrophic factor isoform X1. (211 aa)
SEMA5Bsemaphorin-5B isoform X1. (1102 aa)
MSI2RNA-binding protein Musashi homolog 2 isoform X1. (278 aa)
SOX8Transcription factor SOX-8. (378 aa)
EDNRBEndothelin receptor type B; Belongs to the G-protein coupled receptor 1 family. (443 aa)
SOX9Transcription factor SOX-9. (486 aa)
SOX10Transcription factor SOX-10. (468 aa)
SMOSmoothened homolog; Belongs to the G-protein coupled receptor Fz/Smo family. (783 aa)
SEMA7Asemaphorin-7A; Belongs to the semaphorin family. (665 aa)
SEMA6CLOW QUALITY PROTEIN: semaphorin-6C; Belongs to the semaphorin family. (884 aa)
FN1Fibronectin isoform X5. (2478 aa)
ERBB4Receptor protein-tyrosine kinase. (1308 aa)
RADILRas-associating and dilute domain-containing protein. (1072 aa)
MAPK1Mitogen-activated protein kinase. (343 aa)
PTPRCReceptor-type tyrosine-protein phosphatase C isoform X1. (1258 aa)
EDN1Endothelin-1. (202 aa)
KLHL12Kelch-like protein 12 isoform X5. (684 aa)
RDH10Retinol dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (341 aa)
NRP1Neuropilin; Belongs to the neuropilin family. (924 aa)
SEMA4Fsemaphorin-4F isoform X3; Belongs to the semaphorin family. (772 aa)
SEMA4Bsemaphorin-4B; Belongs to the semaphorin family. (822 aa)
PEF1Peflin isoform X1. (290 aa)
PHACTR4Phosphatase and actin regulator. (747 aa)
ALDH1A2Retinal dehydrogenase 2 isoform X1; Belongs to the aldehyde dehydrogenase family. (526 aa)
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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