(26 nodes) Positive chemotaxis network (Neophocaena asiaeorientalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC112408084	C-C motif chemokine 3-like. (87 aa)
	LGALS3	Galectin. (256 aa)
	BMP4	Bone morphogenetic protein 4 isoform X1. (420 aa)
	ALKBH1	Nucleic acid dioxygenase ALKBH1. (384 aa)
	PGF	Placenta growth factor isoform X1; Belongs to the PDGF/VEGF growth factor family. (170 aa)
	FGF10	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (208 aa)
	SCRIB	LOW QUALITY PROTEIN: protein scribble homolog. (1575 aa)
	COLEC10	Collectin-10. (277 aa)
	CORO1A	Coronin; Belongs to the WD repeat coronin family. (461 aa)
	LOC112399665	Beta-defensin 130-like. (79 aa)
	VEGFD	Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family. (354 aa)
	CXCL10	C-X-C motif chemokine. (103 aa)
	PLXNB3	plexin-B3. (1986 aa)
	CCL16	C-C motif chemokine. (120 aa)
	MET	Hepatocyte growth factor receptor isoform X1. (1382 aa)
	LOC112415217	Beta-defensin 103A-like. (67 aa)
	LRRC1	Leucine-rich repeat-containing protein 1. (443 aa)
	SCG2	Secretogranin-2. (616 aa)
	PDGFB	Platelet-derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. (209 aa)
	VEGFC	Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. (350 aa)
	FGF2	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (304 aa)
	WNT5A	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (380 aa)
	PTPRJ	Receptor-type tyrosine-protein phosphatase eta isoform X1. (1273 aa)
	FGF7	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (194 aa)
	VEGFB	Vascular endothelial growth factor B; Belongs to the PDGF/VEGF growth factor family. (286 aa)
	HGF	Hepatocyte growth factor isoform X1; Belongs to the peptidase S1 family. (734 aa)

Your Current Organism:

Neophocaena asiaeorientalis

NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMP4	FGF10	A0A341AL27	A0A341B1S0	Bone morphogenetic protein 4 isoform X1.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.769
BMP4	FGF2	A0A341AL27	A0A341BF24	Bone morphogenetic protein 4 isoform X1.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.741
BMP4	FGF7	A0A341AL27	A0A341BPK4	Bone morphogenetic protein 4 isoform X1.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.645
BMP4	HGF	A0A341AL27	A0A341C1A0	Bone morphogenetic protein 4 isoform X1.	Hepatocyte growth factor isoform X1; Belongs to the peptidase S1 family.	0.481
BMP4	WNT5A	A0A341AL27	A0A341BKG2	Bone morphogenetic protein 4 isoform X1.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.587
CCL16	CXCL10	A0A341CFT0	A0A341C524	C-C motif chemokine.	C-X-C motif chemokine.	0.772
CXCL10	CCL16	A0A341C524	A0A341CFT0	C-X-C motif chemokine.	C-C motif chemokine.	0.772
CXCL10	FGF2	A0A341C524	A0A341BF24	C-X-C motif chemokine.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.418
CXCL10	LOC112408084	A0A341C524	A0A341CHJ3	C-X-C motif chemokine.	C-C motif chemokine 3-like.	0.882
FGF10	BMP4	A0A341B1S0	A0A341AL27	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Bone morphogenetic protein 4 isoform X1.	0.769
FGF10	FGF2	A0A341B1S0	A0A341BF24	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.513
FGF10	FGF7	A0A341B1S0	A0A341BPK4	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.498
FGF10	HGF	A0A341B1S0	A0A341C1A0	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Hepatocyte growth factor isoform X1; Belongs to the peptidase S1 family.	0.713
FGF10	MET	A0A341B1S0	A0A341CGB1	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Hepatocyte growth factor receptor isoform X1.	0.858
FGF10	PGF	A0A341B1S0	A0A341AVJ5	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Placenta growth factor isoform X1; Belongs to the PDGF/VEGF growth factor family.	0.527
FGF10	VEGFC	A0A341B1S0	A0A341BEQ3	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family.	0.459
FGF10	WNT5A	A0A341B1S0	A0A341BKG2	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.461
FGF2	BMP4	A0A341BF24	A0A341AL27	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Bone morphogenetic protein 4 isoform X1.	0.741
FGF2	CXCL10	A0A341BF24	A0A341C524	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	C-X-C motif chemokine.	0.418
FGF2	FGF10	A0A341BF24	A0A341B1S0	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.513